| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is thiE [H]
Identifier: 86751570
GI number: 86751570
Start: 5062264
End: 5062935
Strand: Direct
Name: thiE [H]
Synonym: RPB_4472
Alternate gene names: 86751570
Gene position: 5062264-5062935 (Clockwise)
Preceding gene: 86751569
Following gene: 86751571
Centisome position: 94.95
GC content: 74.11
Gene sequence:
>672_bases ATGGCCAAGCCTGCCCCGCCGCGCCCGGCGCCGCGCCTCTATCTCGCGACGCCGGTCGTGGACGATCCCGCACAGTTGCT GGCAGCGTTGCCGCACCTGCTCGCCGCCGCCGATGTGGCGGCGGTGCTGCTGCGGCTCGCGCCCTCCGACCCGCGCACGC TGATCACCCGGATCAAGGCGGTGACGGCGGTCGCACAGGCCGGCGGCGCGGCGCTGTTGCTCGACGGCCACGCCGATCTG GTGGCGCGTGGCGGCGCCGATGGCGCGCATCTGTCGGGGCTCGCCGCGATGCAGGAATGGCTGCCGCAATTGCAGCCGCA GCGCATCGCCGGCGTCGGCGCGCTGGAGACGCGGCACGATTCGATGGTCGCGGGTGAAGCCGGCGCCGACTATGTGCTGT TCGGCGAGCCGGCCGCGGATGGCACCCGGCCCTCGACCGAGGCGATCGCCGACCGGCTGAACTGGTGGGCCGAACTGTTC GAGCCGCCCTGCGTCGGCTACGCGATCTCGCGCGACGAGGTTGGAGAATTCGCCGCCGCCGGCGCGGATTTCGTGCTGGT CGGCGACCACATCTGGGCCGAAGCGGACGGCGCTGCGGCGGCGCTCGCGGACGCCGAGGCGGCGCTGAAGCAGGGCTTCG CCGGGACCGCGCCGGCGCCGGCGCAAGGATAA
Upstream 100 bases:
>100_bases CCGGCCAGGCCGCATTCACCCACCGGGCGAAAATGAACTCGCTCGCCAGCAAGGGCGAGTGGTCATCCGACCTCGAAAGC AAGAAGGCCGCATAACGCCG
Downstream 100 bases:
>100_bases TCCATGAAGGCGCTACGCCCGATCTCGATCGCTGCGGCCATGCTGCTGCTCGCCACCGGCGCGTCGGCGCAATTGTCGCT GACGCCGTCGCCGCCCAACC
Product: thiamine monophosphate synthase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MAKPAPPRPAPRLYLATPVVDDPAQLLAALPHLLAAADVAAVLLRLAPSDPRTLITRIKAVTAVAQAGGAALLLDGHADL VARGGADGAHLSGLAAMQEWLPQLQPQRIAGVGALETRHDSMVAGEAGADYVLFGEPAADGTRPSTEAIADRLNWWAELF EPPCVGYAISRDEVGEFAAAGADFVLVGDHIWAEADGAAAALADAEAALKQGFAGTAPAPAQG
Sequences:
>Translated_223_residues MAKPAPPRPAPRLYLATPVVDDPAQLLAALPHLLAAADVAAVLLRLAPSDPRTLITRIKAVTAVAQAGGAALLLDGHADL VARGGADGAHLSGLAAMQEWLPQLQPQRIAGVGALETRHDSMVAGEAGADYVLFGEPAADGTRPSTEAIADRLNWWAELF EPPCVGYAISRDEVGEFAAAGADFVLVGDHIWAEADGAAAALADAEAALKQGFAGTAPAPAQG >Mature_222_residues AKPAPPRPAPRLYLATPVVDDPAQLLAALPHLLAAADVAAVLLRLAPSDPRTLITRIKAVTAVAQAGGAALLLDGHADLV ARGGADGAHLSGLAAMQEWLPQLQPQRIAGVGALETRHDSMVAGEAGADYVLFGEPAADGTRPSTEAIADRLNWWAELFE PPCVGYAISRDEVGEFAAAGADFVLVGDHIWAEADGAAAALADAEAALKQGFAGTAPAPAQG
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22712; Mature: 22581
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPAPPRPAPRLYLATPVVDDPAQLLAALPHLLAAADVAAVLLRLAPSDPRTLITRIKA CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VTAVAQAGGAALLLDGHADLVARGGADGAHLSGLAAMQEWLPQLQPQRIAGVGALETRHD HHHHHHCCCEEEEEECCHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCC SMVAGEAGADYVLFGEPAADGTRPSTEAIADRLNWWAELFEPPCVGYAISRDEVGEFAAA CEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHC GADFVLVGDHIWAEADGAAAALADAEAALKQGFAGTAPAPAQG CCCEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AKPAPPRPAPRLYLATPVVDDPAQLLAALPHLLAAADVAAVLLRLAPSDPRTLITRIKA CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VTAVAQAGGAALLLDGHADLVARGGADGAHLSGLAAMQEWLPQLQPQRIAGVGALETRHD HHHHHHCCCEEEEEECCHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCC SMVAGEAGADYVLFGEPAADGTRPSTEAIADRLNWWAELFEPPCVGYAISRDEVGEFAAA CEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHC GADFVLVGDHIWAEADGAAAALADAEAALKQGFAGTAPAPAQG CCCEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA