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The map label for this gene is aidB [C]

Identifier: 86751552

GI number: 86751552

Start: 5041612

End: 5043393

Strand: Direct

Name: aidB [C]

Synonym: RPB_4454

Alternate gene names: 86751552

Gene position: 5041612-5043393 (Clockwise)

Preceding gene: 86751551

Following gene: 86751553

Centisome position: 94.56

GC content: 69.36

Gene sequence:

>1782_bases
ATGACCTATCGCGCTCCGATCGACGACATCCTGCTCTCCCTCAACCATGGCGCCGGCCTGCAAGCCGCGGTGGCGGCGGG
GCATCTCGGCGACTATGACGGCGAGCTCACCGCGCAGGTGCTGGAAGAGGCCGGCAAGTTCGCCGGCGACATTCTGGCGC
CGCTGAACCGGATCGGCGACAAGCACGGCATCAAGCTGGCGCACAACGCCGTCACCACCGCGCCGGGCTGGCCGGACGCC
TATCAGCGCTGGATCGCGGCGGGCTGGAATGCGGTGTCGGGCCCGGAGGACTTCGGCGGCCAGGGCCTGCCGGGCGCGCT
CAACGCGGTATGCACCGAACTCTGGGCGGCGTCGAACATGGCGTTCGGGCTGTGCCCGCTGCTGACGCTGTCGGCGATCG
ATGCGCTGCATGCGCACGGCAGCGACGAGTTGAAGCGCATCTATCTCGGCAAGCTGGTGTCGGGCGAATGGACCGGCACG
ATGCAGCTCACCGAGCCGCAGGCCGGCTCCGACGTCGGCGCGCTGCGCACCCGCGCCGAGCGCGCGGCCGACGGCAGCTA
CAGGATCTTCGGCAGCAAGATCTTCATCACCTATGGCGACCACGACATGACCGACAACATCGTGCATTTCGTGCTCGCGC
GATTGCCCGATGCGCCCGCCGGCACCAAGGGCATTTCGCTGTTCCTGATTCCGAAATTCCTGGTCAATGCCGACGGCACG
CTGGGCGCGCGCAACGACATCTTCCCGAGCGGCGTCGAGCACAAGCTCGGCATCCACGCCTCGCCGACCTGCACCATGCA
GATGGGCGATCAGGGCGGCGCGATCGGCTATCTGATCGGCGAGGAAAATCGCGGCATGCAGTGCATGTTCACGATGATGA
ATCAGGCCCGCCTCGGCGTCGGCCTCGAAGGCGTCGGCATCGCCGACCGCGCCTATCAGCAGGCCTTGGCCTATGCGCAG
GAGCGCAAGCAGGGCCGCGCCATCGGTAGCGACAGCAAAGGCTCCGACCCGATCATCAAGCATCCCGACGTCAAGCGCAC
GCTGCTGCTGATGCGGGCGCTGACCGGCGCGGCGCGCACGATCTGCTATTCGACCGCGGTGGCGCTGGACATCGCGGCGC
GCAGCAGCGATCCGAAGGTGAAGGCCGCGGCGGCCGCGCGCGCGGCGCTGCTGACGCCGATCGCCAAGGCGTTCTCCACC
GACATCGGCACCGAGGTCGCCTCGCTCGGCGTGCAGATCCACGGCGGCATGGGCTTCATCGAGGAAACCGGCGCCGCGCA
GCATTATCGCGACGCGCGCATCGCGCCGATCTACGAAGGCACCAACGGCATCCAGTCGATCGATCTCGTCACCCGCAAGC
TCGGCGCCCAAGGCGGCGCCTCGGTGTTCGCGCTGCTCGACGAACTATCCATCATCGTCAAGGACGTCGAAGCCTCGAAC
GATCCGGCGTTCGGCGCCACCGGCGTGCGGCTGCGCGACGCGCTGGGCGCGCTCGACCGCACCAGCAGATACTTGCTGGA
GAAGCTCGGAGCCTCGCCGAACGACGCGCTGGCCGGCGCGACGCCGTATCTGCGGCTGTTCGGATCGACGCTCGGCGGCT
GCGCGCTGGCCGCGGAGGCGCTGGCCGCGCGCAACCTCGACGGCGCGAGCGATCCGGCGCGCGCGATCACGCTGGCGCGG
TTCTTCGCCGAGACCGTCGCGGTGCAGGCGGGCGCGCTGGAGCGCAGCGTGGTCGACGCCGCCGCGGTCCTGGCCACCGC
CGACGCCGTGCTGACCGCGTAG

Upstream 100 bases:

>100_bases
CCGCGAAATTGCAGCCGGGCGGCCGGAGGTGACGAAAGGTTGAGAGCAGCGGCGTTTCATGGAAGAAGGCGGGCCAGCTT
TCCTTTGCCGGGACAACGCC

Downstream 100 bases:

>100_bases
ACGGCGACGCATTCACGACAACCGCGCCACAATTGCGGGCTTTTGGGGGAAATGCCATGTCGGACTATCTGATCGTCAGC
GATGAAGACGCCGTGCGCGT

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MTYRAPIDDILLSLNHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGDKHGIKLAHNAVTTAPGWPDA
YQRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNMAFGLCPLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGT
MQLTEPQAGSDVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGT
LGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTMMNQARLGVGLEGVGIADRAYQQALAYAQ
ERKQGRAIGSDSKGSDPIIKHPDVKRTLLLMRALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFST
DIGTEVASLGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSIIVKDVEASN
DPAFGATGVRLRDALGALDRTSRYLLEKLGASPNDALAGATPYLRLFGSTLGGCALAAEALAARNLDGASDPARAITLAR
FFAETVAVQAGALERSVVDAAAVLATADAVLTA

Sequences:

>Translated_593_residues
MTYRAPIDDILLSLNHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGDKHGIKLAHNAVTTAPGWPDA
YQRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNMAFGLCPLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGT
MQLTEPQAGSDVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGT
LGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTMMNQARLGVGLEGVGIADRAYQQALAYAQ
ERKQGRAIGSDSKGSDPIIKHPDVKRTLLLMRALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFST
DIGTEVASLGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSIIVKDVEASN
DPAFGATGVRLRDALGALDRTSRYLLEKLGASPNDALAGATPYLRLFGSTLGGCALAAEALAARNLDGASDPARAITLAR
FFAETVAVQAGALERSVVDAAAVLATADAVLTA
>Mature_592_residues
TYRAPIDDILLSLNHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGDKHGIKLAHNAVTTAPGWPDAY
QRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNMAFGLCPLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGTM
QLTEPQAGSDVGALRTRAERAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGTL
GARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTMMNQARLGVGLEGVGIADRAYQQALAYAQE
RKQGRAIGSDSKGSDPIIKHPDVKRTLLLMRALTGAARTICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTD
IGTEVASLGVQIHGGMGFIEETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSIIVKDVEASND
PAFGATGVRLRDALGALDRTSRYLLEKLGASPNDALAGATPYLRLFGSTLGGCALAAEALAARNLDGASDPARAITLARF
FAETVAVQAGALERSVVDAAAVLATADAVLTA

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=367, Percent_Identity=29.9727520435967, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI4501857, Length=390, Percent_Identity=27.1794871794872, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI4501859, Length=413, Percent_Identity=25.181598062954, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI21361497, Length=426, Percent_Identity=26.2910798122066, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI4557235, Length=432, Percent_Identity=25.2314814814815, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI76496475, Length=432, Percent_Identity=25.2314814814815, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI4557231, Length=370, Percent_Identity=29.4594594594595, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI187960098, Length=370, Percent_Identity=29.4594594594595, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI226958414, Length=358, Percent_Identity=26.2569832402235, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI226958412, Length=358, Percent_Identity=26.2569832402235, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI7656849, Length=380, Percent_Identity=26.5789473684211, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI87082384, Length=384, Percent_Identity=30.7291666666667, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI87081958, Length=377, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=403, Percent_Identity=27.7915632754342, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=28.1481481481481, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=438, Percent_Identity=28.9954337899543, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17570075, Length=379, Percent_Identity=28.2321899736148, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=434, Percent_Identity=27.6497695852535, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=341, Percent_Identity=28.1524926686217, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=341, Percent_Identity=28.1524926686217, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=354, Percent_Identity=25.7062146892655, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=424, Percent_Identity=28.0660377358491, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=359, Percent_Identity=27.5766016713092, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=458, Percent_Identity=25.9825327510917, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=358, Percent_Identity=26.536312849162, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=305, Percent_Identity=26.8852459016393, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=28.0851063829787, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21356377, Length=382, Percent_Identity=29.0575916230367, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363737, Length=354, Percent_Identity=26.8361581920904, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646207, Length=428, Percent_Identity=27.803738317757, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21355753, Length=429, Percent_Identity=28.4382284382284, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24660351, Length=425, Percent_Identity=29.6470588235294, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24666513, Length=358, Percent_Identity=28.2122905027933, Blast_Score=100, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 61830; Mature: 61699

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRAPIDDILLSLNHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGD
CCCCCCHHHHHEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KHGIKLAHNAVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNM
CCCCEEECCCEECCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCC
AFGLCPLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGTMQLTEPQAGSDVGALRTRAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
RAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGT
HHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCC
LGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTMMNQARLGV
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
GLEGVGIADRAYQQALAYAQERKQGRAIGSDSKGSDPIIKHPDVKRTLLLMRALTGAART
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTDIGTEVASLGVQIHGGMGFI
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH
EETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSIIVKDVEASN
HHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
DPAFGATGVRLRDALGALDRTSRYLLEKLGASPNDALAGATPYLRLFGSTLGGCALAAEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LAARNLDGASDPARAITLARFFAETVAVQAGALERSVVDAAAVLATADAVLTA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYRAPIDDILLSLNHGAGLQAAVAAGHLGDYDGELTAQVLEEAGKFAGDILAPLNRIGD
CCCCCHHHHHEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KHGIKLAHNAVTTAPGWPDAYQRWIAAGWNAVSGPEDFGGQGLPGALNAVCTELWAASNM
CCCCEEECCCEECCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCC
AFGLCPLLTLSAIDALHAHGSDELKRIYLGKLVSGEWTGTMQLTEPQAGSDVGALRTRAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
RAADGSYRIFGSKIFITYGDHDMTDNIVHFVLARLPDAPAGTKGISLFLIPKFLVNADGT
HHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCC
LGARNDIFPSGVEHKLGIHASPTCTMQMGDQGGAIGYLIGEENRGMQCMFTMMNQARLGV
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
GLEGVGIADRAYQQALAYAQERKQGRAIGSDSKGSDPIIKHPDVKRTLLLMRALTGAART
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ICYSTAVALDIAARSSDPKVKAAAAARAALLTPIAKAFSTDIGTEVASLGVQIHGGMGFI
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH
EETGAAQHYRDARIAPIYEGTNGIQSIDLVTRKLGAQGGASVFALLDELSIIVKDVEASN
HHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
DPAFGATGVRLRDALGALDRTSRYLLEKLGASPNDALAGATPYLRLFGSTLGGCALAAEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LAARNLDGASDPARAITLARFFAETVAVQAGALERSVVDAAAVLATADAVLTA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]