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The map label for this gene is 86751541

Identifier: 86751541

GI number: 86751541

Start: 5030072

End: 5030509

Strand: Reverse

Name: 86751541

Synonym: RPB_4443

Alternate gene names: NA

Gene position: 5030509-5030072 (Counterclockwise)

Preceding gene: 86751542

Following gene: 86751537

Centisome position: 94.35

GC content: 58.9

Gene sequence:

>438_bases
ATGTCGAACGAACAATATCGATCGCTCTCCGGAACGCCGTTGCTCCTGAACACGTCGGGCTCCTATCAATCGTATTCCGG
AACCCCGCTGATCATCGCGCAGAAAGGCGAGTACCATTCGTATTCCGGCTCGCTGATCCTGCTCCCGGCCCTGAAATCGT
ACTATTCGTTCTCGGGGACGCCGCTGCTGATCAATACGACCGGACCGTACAGATCGTTCTCGGGAACACCCCTGCTTCTG
AGCCAGAACGGGGCCTATCGATCGTTCTCGGGAATGCCGCTCCTCATCGGAACTTCCGGACTCTACAAGTCGATGTCCGG
AACGCCGCTGATCCTCCAGCAGAAGGGGGCCTATCGGTCGTTCTCGGGCCGCCCCCTGCTGATCGACCGGCCGACACCGT
TCTCGTCGCTGTTCGGTCTGCCGACACTCTTGAAGTAA

Upstream 100 bases:

>100_bases
AAGTCGTTCTCCGGCTATCCGCTGCTGCTCAATCTCTGGGACTAGTGGACCGTCCCCATCACAGGCGGATGGCCACAGCC
GTTCGCCGAAAGGAAGTTCG

Downstream 100 bases:

>100_bases
CTGGACCCAACGAGCCGGGAACGTCACGCCCGGCTCGCACCTCCCAGGTTACTCCATTGCGCCGACGTCTCCCCGAAGGT
TCGGGGAGACGTCGGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSNEQYRSLSGTPLLLNTSGSYQSYSGTPLIIAQKGEYHSYSGSLILLPALKSYYSFSGTPLLINTTGPYRSFSGTPLLL
SQNGAYRSFSGMPLLIGTSGLYKSMSGTPLILQQKGAYRSFSGRPLLIDRPTPFSSLFGLPTLLK

Sequences:

>Translated_145_residues
MSNEQYRSLSGTPLLLNTSGSYQSYSGTPLIIAQKGEYHSYSGSLILLPALKSYYSFSGTPLLINTTGPYRSFSGTPLLL
SQNGAYRSFSGMPLLIGTSGLYKSMSGTPLILQQKGAYRSFSGRPLLIDRPTPFSSLFGLPTLLK
>Mature_144_residues
SNEQYRSLSGTPLLLNTSGSYQSYSGTPLIIAQKGEYHSYSGSLILLPALKSYYSFSGTPLLINTTGPYRSFSGTPLLLS
QNGAYRSFSGMPLLIGTSGLYKSMSGTPLILQQKGAYRSFSGRPLLIDRPTPFSSLFGLPTLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15676; Mature: 15545

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEQYRSLSGTPLLLNTSGSYQSYSGTPLIIAQKGEYHSYSGSLILLPALKSYYSFSGT
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHCCCCC
PLLINTTGPYRSFSGTPLLLSQNGAYRSFSGMPLLIGTSGLYKSMSGTPLILQQKGAYRS
EEEEECCCCCCCCCCCEEEEECCCCCEECCCCEEEEECCCHHHCCCCCEEEEECCCCCCC
FSGRPLLIDRPTPFSSLFGLPTLLK
CCCCEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SNEQYRSLSGTPLLLNTSGSYQSYSGTPLIIAQKGEYHSYSGSLILLPALKSYYSFSGT
CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHCCCCC
PLLINTTGPYRSFSGTPLLLSQNGAYRSFSGMPLLIGTSGLYKSMSGTPLILQQKGAYRS
EEEEECCCCCCCCCCCEEEEECCCCCEECCCCEEEEECCCHHHCCCCCEEEEECCCCCCC
FSGRPLLIDRPTPFSSLFGLPTLLK
CCCCEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA