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The map label for this gene is 86751537

Identifier: 86751537

GI number: 86751537

Start: 5027166

End: 5027486

Strand: Reverse

Name: 86751537

Synonym: RPB_4438

Alternate gene names: NA

Gene position: 5027486-5027166 (Counterclockwise)

Preceding gene: 86751541

Following gene: 86751536

Centisome position: 94.3

GC content: 66.98

Gene sequence:

>321_bases
ATGTCTTCACCCGCCAGCAAGTCCGGCACTGCACGTCGCAACGCCAAGGGAGCGCCCGGACCGGACGCGCCGGCGACCGC
GAAGCTTTTCATGCATGGCCGCAGCCAGGCCGTGCGGCTGCCCAAGGAGTTCCGCTTCGAGGGCACCGAGGTGCGCGTCC
GCCGGGTCGGCGACAAGGTGATCCTGGAGCCGATGGAGAAGAAACCGTTCGATTACGCCGCTTGGCGCGCGCGGCTGGAT
GCACTCGGCGCGCGAGATTTCCTCGCCGATGGCATGCCGGACGATCCGTCGGTCCAGCCCGAAGATTTCGGGATCGATTG
A

Upstream 100 bases:

>100_bases
CGCTGTTCGGTGCGCGGCTGCCCGGCCTTCTGGACGAATTGACCGATGCGCTGGTCGCATGATAGATATCAATGGTGAAT
ACCAATCTTGAGGGCCGCCG

Downstream 100 bases:

>100_bases
GTATGATCTGCCTCGATACGAATGTTGTCATCGGCATCATCAATGGCCGTGCCCCCCAACTAGAAGCGCGATTTCGGGAA
ACCATCGGCGTTGTGCCCGT

Product: SpoVT/AbrB-like

Products: NA

Alternate protein names: SpoVT/AbrB-Like; Virulence-Associated Protein B; Nitrogen Regulatory Protein; SpoVT/AbrB-Like Protein

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSSPASKSGTARRNAKGAPGPDAPATAKLFMHGRSQAVRLPKEFRFEGTEVRVRRVGDKVILEPMEKKPFDYAAWRARLD
ALGARDFLADGMPDDPSVQPEDFGID

Sequences:

>Translated_106_residues
MSSPASKSGTARRNAKGAPGPDAPATAKLFMHGRSQAVRLPKEFRFEGTEVRVRRVGDKVILEPMEKKPFDYAAWRARLD
ALGARDFLADGMPDDPSVQPEDFGID
>Mature_105_residues
SSPASKSGTARRNAKGAPGPDAPATAKLFMHGRSQAVRLPKEFRFEGTEVRVRRVGDKVILEPMEKKPFDYAAWRARLDA
LGARDFLADGMPDDPSVQPEDFGID

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11629; Mature: 11498

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPASKSGTARRNAKGAPGPDAPATAKLFMHGRSQAVRLPKEFRFEGTEVRVRRVGDKV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCHHHCCCCCEEEEEHHCCHH
ILEPMEKKPFDYAAWRARLDALGARDFLADGMPDDPSVQPEDFGID
EECCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSPASKSGTARRNAKGAPGPDAPATAKLFMHGRSQAVRLPKEFRFEGTEVRVRRVGDKV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCHHHCCCCCEEEEEHHCCHH
ILEPMEKKPFDYAAWRARLDALGARDFLADGMPDDPSVQPEDFGID
EECCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA