| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751449
Identifier: 86751449
GI number: 86751449
Start: 4931383
End: 4932540
Strand: Reverse
Name: 86751449
Synonym: RPB_4347
Alternate gene names: NA
Gene position: 4932540-4931383 (Counterclockwise)
Preceding gene: 86751450
Following gene: 86751448
Centisome position: 92.51
GC content: 69.6
Gene sequence:
>1158_bases ATGATCACGCGACTCGCTGTTTCCGGCTACCGATCGCTGCGCGACGTGCGGCTGTCGCTCGGTCCGCTCAACGTCGTCAC CGGCGCCAACGGCACTGGCAAATCGAGCCTGTATCGGGCGCTGAAGCTGCTCGCGGACATCGCGCAGGGCCGGGTGATCC AGTCGCTCGCCGCCGAGGGCGGGCTGCCGTCGACATTGTGGGCCGGGCCCGAAACGCTGTCGCGGTCGATGAAGCAGGGC GTGCATCCGGTGCAGGGCACGACGCGCAGCAAGCGGGTCGGCCTCAAGCTCGGCTTTGCCGGCACCGACTACGGCTATGC GATCGACCTCGGATTGCCGCAGGCGCCGAACAGTTCGTTGTTCGCGCGCGATCCCGAGATCAAGGCCGAGAGCGTGTGGA CCGGCGAACTGCTCGGCCGCGCCAATGCGTTTGCCGAACGCCGTGGCCCCTCGGTGCGGGTGCGCGACGAGGGCGGCCAG TGGCGGGAGACCTACCGGACGCTCGCCACCTTCGACAGCATGATGACGCACTGCGCCGATCCCAAGGATGCGCTGGAACT GCTGCTGCTGCGCGAGCGCATGAACGGCTGGCGGTTCTACGATCAACTGCGCACCGACCGCGATGCCCCGGCGCGGCGGC CGCAGATCGGCACCTACACGCCGGTGCTGGCGAGCGACGGCGCCGATCTCGCCGCCGCGATTCAGACCATCATCGAGATC GGCAATCCGGACCAGCTCGACGACACCGTCGCCGACGCCTTTCCCCGCGCGCGCCTCGCCGTCGCGGCCCTCGACGGCTA TTTCGAACTGGAGATGCAGCAGCACGGCTTGCTCCGCCCGTTGAAGGCGGCCGAACTGTCGGACGGCACGTTGCGCTATC TGCTGCTGGTCGCGGCGCTGCTGTCGCCGCGGCCGCCGGACCTGATGATCCTGAACGAACCCGAGGCGAGCCTGCACCCC GATCTGCTGGCGCCCTTGGCCCGGCTGATTGCGGCGGCTGCGGAGCGGTCGCAGATCATCGTGGTCTCGCACGCGCCCGG CCTGGTGTCGGCGCTGGACCGCACAGCCGACAGCCGGCGGATCGTGCTGGAGAAGCAACTGAGCGAGACCCTCGTGCAGG ACGACACGCCGCCCGCCTGGGCGTGGCCGTCGCGCTAG
Upstream 100 bases:
>100_bases AGCGCCCGATAGACGCAGGCAGATGCTGACGCCGCGCATGTGAAACGGCGCCGTCGATCTGGTATTCAAGCGCTGAACGT AACGCCTCCGCAGGTGAGGG
Downstream 100 bases:
>100_bases CGCAGGATCCCGCAAAGCGGAGACCGGTTTTCGGACACGATCATGCGCCATGGACTTGCCGATCGTTTCCGCCGGCCGGC TGTTGTCGTGCCCTCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; SMC Domain Protein; Recf Like Family Protein; DNA Replication And Repair Protein RecF; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALKLLADIAQGRVIQSLAAEGGLPSTLWAGPETLSRSMKQG VHPVQGTTRSKRVGLKLGFAGTDYGYAIDLGLPQAPNSSLFARDPEIKAESVWTGELLGRANAFAERRGPSVRVRDEGGQ WRETYRTLATFDSMMTHCADPKDALELLLLRERMNGWRFYDQLRTDRDAPARRPQIGTYTPVLASDGADLAAAIQTIIEI GNPDQLDDTVADAFPRARLAVAALDGYFELEMQQHGLLRPLKAAELSDGTLRYLLLVAALLSPRPPDLMILNEPEASLHP DLLAPLARLIAAAAERSQIIVVSHAPGLVSALDRTADSRRIVLEKQLSETLVQDDTPPAWAWPSR
Sequences:
>Translated_385_residues MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALKLLADIAQGRVIQSLAAEGGLPSTLWAGPETLSRSMKQG VHPVQGTTRSKRVGLKLGFAGTDYGYAIDLGLPQAPNSSLFARDPEIKAESVWTGELLGRANAFAERRGPSVRVRDEGGQ WRETYRTLATFDSMMTHCADPKDALELLLLRERMNGWRFYDQLRTDRDAPARRPQIGTYTPVLASDGADLAAAIQTIIEI GNPDQLDDTVADAFPRARLAVAALDGYFELEMQQHGLLRPLKAAELSDGTLRYLLLVAALLSPRPPDLMILNEPEASLHP DLLAPLARLIAAAAERSQIIVVSHAPGLVSALDRTADSRRIVLEKQLSETLVQDDTPPAWAWPSR >Mature_385_residues MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALKLLADIAQGRVIQSLAAEGGLPSTLWAGPETLSRSMKQG VHPVQGTTRSKRVGLKLGFAGTDYGYAIDLGLPQAPNSSLFARDPEIKAESVWTGELLGRANAFAERRGPSVRVRDEGGQ WRETYRTLATFDSMMTHCADPKDALELLLLRERMNGWRFYDQLRTDRDAPARRPQIGTYTPVLASDGADLAAAIQTIIEI GNPDQLDDTVADAFPRARLAVAALDGYFELEMQQHGLLRPLKAAELSDGTLRYLLLVAALLSPRPPDLMILNEPEASLHP DLLAPLARLIAAAAERSQIIVVSHAPGLVSALDRTADSRRIVLEKQLSETLVQDDTPPAWAWPSR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41927; Mature: 41927
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALKLLADIAQGRVIQSLAAEG CCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GLPSTLWAGPETLSRSMKQGVHPVQGTTRSKRVGLKLGFAGTDYGYAIDLGLPQAPNSSL CCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCC FARDPEIKAESVWTGELLGRANAFAERRGPSVRVRDEGGQWRETYRTLATFDSMMTHCAD CCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PKDALELLLLRERMNGWRFYDQLRTDRDAPARRPQIGTYTPVLASDGADLAAAIQTIIEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GNPDQLDDTVADAFPRARLAVAALDGYFELEMQQHGLLRPLKAAELSDGTLRYLLLVAAL CCCCHHHHHHHHHCCHHHHHHHHHCCCEEEEEHHCCCCCCHHHHCCCCCHHHHHHHHHHH LSPRPPDLMILNEPEASLHPDLLAPLARLIAAAAERSQIIVVSHAPGLVSALDRTADSRR HCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCH IVLEKQLSETLVQDDTPPAWAWPSR HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALKLLADIAQGRVIQSLAAEG CCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GLPSTLWAGPETLSRSMKQGVHPVQGTTRSKRVGLKLGFAGTDYGYAIDLGLPQAPNSSL CCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCC FARDPEIKAESVWTGELLGRANAFAERRGPSVRVRDEGGQWRETYRTLATFDSMMTHCAD CCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PKDALELLLLRERMNGWRFYDQLRTDRDAPARRPQIGTYTPVLASDGADLAAAIQTIIEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GNPDQLDDTVADAFPRARLAVAALDGYFELEMQQHGLLRPLKAAELSDGTLRYLLLVAAL CCCCHHHHHHHHHCCHHHHHHHHHCCCEEEEEHHCCCCCCHHHHCCCCCHHHHHHHHHHH LSPRPPDLMILNEPEASLHPDLLAPLARLIAAAAERSQIIVVSHAPGLVSALDRTADSRR HCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCH IVLEKQLSETLVQDDTPPAWAWPSR HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA