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The map label for this gene is yhdE [C]

Identifier: 86751448

GI number: 86751448

Start: 4930606

End: 4931229

Strand: Reverse

Name: yhdE [C]

Synonym: RPB_4346

Alternate gene names: 86751448

Gene position: 4931229-4930606 (Counterclockwise)

Preceding gene: 86751449

Following gene: 86751447

Centisome position: 92.49

GC content: 70.51

Gene sequence:

>624_bases
ATGCTCGGCCGTCCCAAACTCGTTCTCGCCTCCGGCTCGCCGCGACGGCTCGCGCTGCTCAACCAGGCCGGGATCGAGCC
CGATGCGCTGCGCCCGGCGGATGTCGACGAGACCCCGACCAAGGGGGAGCTGCCGCGCGCCTGCGCCAACCGGCTGGCCC
GCGCCAAGGCCGAGGCGGCGCTCAAATCGGTGCAGCTCGACGACGATTTGCGCGGCGCCTTCCTGCTCGCCGCCGACACC
GTGGTGGCGGTCGGCCGCCGCATCCTGCCCAAGGCCGAGCTGGTCGACGAGGCCTCGCAATGCCTGCGGCTGCTCTCTGG
CCGCAACCACCGGGTCTACACCGCGGTGTGCCTGGTGACGCCGAAGGGCAGCTTCCGCCAGCGCCTGATCGAGACCAAGG
TCCGCTTCAAGCGGCTGTCGGAGGAGGACATCGACGGCTATGTCGCCTCCGGCGAATGGCGCGGCAAGGCCGGCGGCTAC
GCCGTGCAGGGCATCGCCGGCAGCTTCGTGGTCAAGATCGTCGGCTCCTACACCAACATCGTCGGCCTGCCGCTGTACGA
GACGACGTCGCTGCTCGGCGGCGAGGGCTACCCGATCCGGTTCGGCTGGCTCAATGCCTCCTGA

Upstream 100 bases:

>100_bases
ACTTGCCGATCGTTTCCGCCGGCCGGCTGTTGTCGTGCCCTCTGCCTTCCGATAGGTTCCGCGCGCCTTTCCCTGCCATC
GCTCGAATCAAAAGTTCCGC

Downstream 100 bases:

>100_bases
GCCGCCCGCCGCCAAGCCGGCCAAACCTCTCAAGACGAAACCCTGCCCGATCTGCGGCAAGCCGGCGACGGAGGCATCGC
GCCCGTTCTGCAGCGAACGC

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLGRPKLVLASGSPRRLALLNQAGIEPDALRPADVDETPTKGELPRACANRLARAKAEAALKSVQLDDDLRGAFLLAADT
VVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTAVCLVTPKGSFRQRLIETKVRFKRLSEEDIDGYVASGEWRGKAGGY
AVQGIAGSFVVKIVGSYTNIVGLPLYETTSLLGGEGYPIRFGWLNAS

Sequences:

>Translated_207_residues
MLGRPKLVLASGSPRRLALLNQAGIEPDALRPADVDETPTKGELPRACANRLARAKAEAALKSVQLDDDLRGAFLLAADT
VVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTAVCLVTPKGSFRQRLIETKVRFKRLSEEDIDGYVASGEWRGKAGGY
AVQGIAGSFVVKIVGSYTNIVGLPLYETTSLLGGEGYPIRFGWLNAS
>Mature_207_residues
MLGRPKLVLASGSPRRLALLNQAGIEPDALRPADVDETPTKGELPRACANRLARAKAEAALKSVQLDDDLRGAFLLAADT
VVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTAVCLVTPKGSFRQRLIETKVRFKRLSEEDIDGYVASGEWRGKAGGY
AVQGIAGSFVVKIVGSYTNIVGLPLYETTSLLGGEGYPIRFGWLNAS

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=206, Percent_Identity=37.8640776699029, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI310133124, Length=145, Percent_Identity=40, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI291045183, Length=205, Percent_Identity=34.6341463414634, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI291045181, Length=140, Percent_Identity=40, Blast_Score=84, Evalue=8e-17,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=44.0860215053763, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI87081830, Length=194, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193202443, Length=181, Percent_Identity=31.4917127071823, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI78706856, Length=188, Percent_Identity=35.1063829787234, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 22320; Mature: 22320

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRPKLVLASGSPRRLALLNQAGIEPDALRPADVDETPTKGELPRACANRLARAKAEAA
CCCCCCEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKSVQLDDDLRGAFLLAADTVVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTAVCLVT
HHHCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PKGSFRQRLIETKVRFKRLSEEDIDGYVASGEWRGKAGGYAVQGIAGSFVVKIVGSYTNI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHE
VGLPLYETTSLLGGEGYPIRFGWLNAS
EECCHHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure
MLGRPKLVLASGSPRRLALLNQAGIEPDALRPADVDETPTKGELPRACANRLARAKAEAA
CCCCCCEEEECCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LKSVQLDDDLRGAFLLAADTVVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTAVCLVT
HHHCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
PKGSFRQRLIETKVRFKRLSEEDIDGYVASGEWRGKAGGYAVQGIAGSFVVKIVGSYTNI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHE
VGLPLYETTSLLGGEGYPIRFGWLNAS
EECCHHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA