Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751440

Identifier: 86751440

GI number: 86751440

Start: 4923334

End: 4924569

Strand: Reverse

Name: 86751440

Synonym: RPB_4338

Alternate gene names: NA

Gene position: 4924569-4923334 (Counterclockwise)

Preceding gene: 86751441

Following gene: 86751438

Centisome position: 92.36

GC content: 67.64

Gene sequence:

>1236_bases
ATGATTCGCCGTATGCTGATCGCCTTGATTCGGAACCCGTCCCGCCGCGCGTCGATGCCGCGCAAGTCGAGCGTCGCGTT
GCTGATGCTGTTTGTGACCGCGTCGCCGGCGCTCGCCGAAACCGCCCCGCCGCTGCCGTTCGCGGTGGCCAATGCGCGGG
CGCAAGCCGCCTCGCCGCAGGCGATCGCCGAGTATCGCTACCGGCTGCAGCAATATCAGGCCGCACGCGCCGAATACGAC
GCCGACGCCGAGGCGTATTGGACCGCGATCGCCGACAAGCGCCGCACCCGCAACGCCAAGCGCCGCGCCGGCGACCGGAT
CACGGCGGATGACTACGTGCTCGCGCAGCCGCCGGTGTACAACGGACCGAAGCGTCCGGTCGATCCGGAACCGACGCCGC
AGCCGCCGCGCGAGCGCCGCAGCATTCCGGTGGTCGCCGATTTTCTCAAGGCGGCCGCGCAGCATTATCAGTTCACGCCG
CAGCGGCCGGCGGCGGAGATCGAGTTCAAGCGCGCCTATGCGCGCACCGCGATCGCGATGGGGCTGACCCGCGACCAGGC
GGTACGGGTCTATGCGTTCGAAACCGGCGGCAATGGCGATCACGACATGCAGTCGGGGCTGAGCAAGTCGCGGCCGGGCT
CGCGCGCGATCTCCACCGCGATCGGCTACAATCAGTTGCTCACCACCAACACGCTGGTGCTGCTCGCCGAGCAGGGCAAC
CACATCCTCAAGGCGCTGAACGACAAGGCGGCGCGCTTGTCCGGCGCGCCACGTGCCGCGCTGGAGCGCAAGATCGTGGT
GGTGAAGCGGATGGTGGCGTTGGCGCGGTCGATCCCGGGCAATTGGAGCGAGCACGAAAAACTCGGCCGCACGCCGCAGG
GCTGGGGCGTGCATGCGCTGGTGCTCGACATCGATGTCGGCCCGTTGCTGCAGACCCACAAGCTGCTGACCTCGGTGAAT
TTCGCCCGGCAGAAGGGCTACATGCAGCCGTTGACCGCCGCCGAGCTGGAAATGATGAATCTCACCGGCGACAGCACCGG
GCTCGACATGGTGACGATGCCGCAGGCGCTGCGCGAAGTGGTGCCGACTGCGAATTTCTTTCAGCGCTCGGGCTACGAGC
GCAATCCGGTAGCGATCCGCCACAACACCGTGGCGAAGCTGCTCGCGATCACCGATTCGCGGATGGATGCCAACAGCGCC
AATCCCGGCGCGCGCGAACTCGCCGCCGCGTTCTGA

Upstream 100 bases:

>100_bases
TTCGCCTGGAAGTAGCGTCCGCTGGCGCGCGCATCGGGTTTGCGATTTGCCGCAGGAGGCGAAGCCGGGATGAAGCGATT
CATTCACCCCTGAATGCGAT

Downstream 100 bases:

>100_bases
TTGTGCCGGCTGCGATCAGCGGTCCGGCCCGAATTTGAAGCTGCCATCGTCTTCCAGGAACGGTCCGGTGCGCATGTAGA
GCTGGCCGTTGGCGCCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD
ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP
QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN
HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN
FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA
NPGARELAAAF

Sequences:

>Translated_411_residues
MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD
ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP
QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN
HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN
FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA
NPGARELAAAF
>Mature_411_residues
MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD
ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP
QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN
HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN
FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA
NPGARELAAAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45196; Mature: 45196

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQ
CHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCHHHCCCHH
AIAEYRYRLQQYQAARAEYDADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
NGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTPQRPAAEIEFKRAYARTAIAM
CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN
CCCCCCEEEEEEEECCCCCCHHHHHCHHHCCCCCHHHHHHHCHHHHHHCCEEEEEECCCC
HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEE
VLDIDVGPLLQTHKLLTSVNFARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREV
EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHH
VPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSANPGARELAAAF
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQ
CHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCHHHCCCHH
AIAEYRYRLQQYQAARAEYDADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
NGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTPQRPAAEIEFKRAYARTAIAM
CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN
CCCCCCEEEEEEEECCCCCCHHHHHCHHHCCCCCHHHHHHHCHHHHHHCCEEEEEECCCC
HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEE
VLDIDVGPLLQTHKLLTSVNFARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREV
EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHH
VPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSANPGARELAAAF
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA