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The map label for this gene is nudL [H]

Identifier: 86751441

GI number: 86751441

Start: 4924655

End: 4925281

Strand: Reverse

Name: nudL [H]

Synonym: RPB_4339

Alternate gene names: 86751441

Gene position: 4925281-4924655 (Counterclockwise)

Preceding gene: 86751443

Following gene: 86751440

Centisome position: 92.38

GC content: 70.18

Gene sequence:

>627_bases
ATGAGCCATCCGCACAACGACACTTTGCGCGCCGATATCGCCGCGCGCTGCCGCGTCTTTCCGCGCCACGACGACGGGCT
GACGCCGCACGGCCTCAAGCGCGCCGCCGTCGCCATCACGGTGGTGGCCGGCGACGACGGCGCGGCCGCGTTCCTGCTGA
CGTTCCGGGCCGCGCGGCTGCGCGCGCACAGCAACCAGTGGGCGTTGCCGGGCGGCCGCTGCGATCCGGGCGAGACCGCC
CCCGAGACCGCGCTGCGGGAATTGCACGAGGAACTCGGGCTGGAACTGCGGGCCGGCGACGTGCTCGGAATGCTCGACGA
CTATCCGACCCGCTCCGGCTATCTGATCACGCCGGTGATTGCCTGGGCCGCTACCGCGGCGGTGCTCGCGCCCAATCCCG
ACGAGGTCGCCTCGGTGCATCACATTGCTCTCGCCGGCATCGCCCGGGAAGACGCGTTCGATTTCACGCGGATTCCGGAG
AGCGAGCGTCGCGTGGTCAGGTTCCGCCACGACGGTGACTACATCCACGCGCCGACCGCGGCGCTGATCTATCAGTTCCG
CGAAGTGCTGGCCGGCCGGGTGACGCGCGTCGCAGATCTGGAACAGCCGGTGTTCGCCTGGAAGTAG

Upstream 100 bases:

>100_bases
TCAGGCTGCGGGCAGTCTCGGTCATGCGCGGTGTTTCCTCCGCCACGGAAACGCCGCGGCGATGGTTTCCTCGGGCACGC
CGCCGGTGTAGTCAAGCCGG

Downstream 100 bases:

>100_bases
CGTCCGCTGGCGCGCGCATCGGGTTTGCGATTTGCCGCAGGAGGCGAAGCCGGGATGAAGCGATTCATTCACCCCTGAAT
GCGATATGATTCGCCGTATG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSHPHNDTLRADIAARCRVFPRHDDGLTPHGLKRAAVAITVVAGDDGAAAFLLTFRAARLRAHSNQWALPGGRCDPGETA
PETALRELHEELGLELRAGDVLGMLDDYPTRSGYLITPVIAWAATAAVLAPNPDEVASVHHIALAGIAREDAFDFTRIPE
SERRVVRFRHDGDYIHAPTAALIYQFREVLAGRVTRVADLEQPVFAWK

Sequences:

>Translated_208_residues
MSHPHNDTLRADIAARCRVFPRHDDGLTPHGLKRAAVAITVVAGDDGAAAFLLTFRAARLRAHSNQWALPGGRCDPGETA
PETALRELHEELGLELRAGDVLGMLDDYPTRSGYLITPVIAWAATAAVLAPNPDEVASVHHIALAGIAREDAFDFTRIPE
SERRVVRFRHDGDYIHAPTAALIYQFREVLAGRVTRVADLEQPVFAWK
>Mature_207_residues
SHPHNDTLRADIAARCRVFPRHDDGLTPHGLKRAAVAITVVAGDDGAAAFLLTFRAARLRAHSNQWALPGGRCDPGETAP
ETALRELHEELGLELRAGDVLGMLDDYPTRSGYLITPVIAWAATAAVLAPNPDEVASVHHIALAGIAREDAFDFTRIPES
ERRVVRFRHDGDYIHAPTAALIYQFREVLAGRVTRVADLEQPVFAWK

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=109, Percent_Identity=36.697247706422, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22796; Mature: 22665

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPHNDTLRADIAARCRVFPRHDDGLTPHGLKRAAVAITVVAGDDGAAAFLLTFRAARL
CCCCCCCHHHHHHHHHCEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
RAHSNQWALPGGRCDPGETAPETALRELHEELGLELRAGDVLGMLDDYPTRSGYLITPVI
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCEEEHHCCCCCCCCEEHHHHH
AWAATAAVLAPNPDEVASVHHIALAGIAREDAFDFTRIPESERRVVRFRHDGDYIHAPTA
HHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCEEECCHH
ALIYQFREVLAGRVTRVADLEQPVFAWK
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SHPHNDTLRADIAARCRVFPRHDDGLTPHGLKRAAVAITVVAGDDGAAAFLLTFRAARL
CCCCCCHHHHHHHHHCEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
RAHSNQWALPGGRCDPGETAPETALRELHEELGLELRAGDVLGMLDDYPTRSGYLITPVI
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCEEEHHCCCCCCCCEEHHHHH
AWAATAAVLAPNPDEVASVHHIALAGIAREDAFDFTRIPESERRVVRFRHDGDYIHAPTA
HHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCEEECCHH
ALIYQFREVLAGRVTRVADLEQPVFAWK
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA