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The map label for this gene is phoD [H]

Identifier: 86751435

GI number: 86751435

Start: 4917658

End: 4919295

Strand: Direct

Name: phoD [H]

Synonym: RPB_4333

Alternate gene names: 86751435

Gene position: 4917658-4919295 (Clockwise)

Preceding gene: 86751434

Following gene: 86751436

Centisome position: 92.24

GC content: 70.76

Gene sequence:

>1638_bases
ATGCACGATGTACCGGCGGCAACTGCTTGCCGAATGGTACCGTCGATGTCCCCTCACCCACCCTCCTCCGGCCTCGCCTT
CGACCGCCGCATGCTGCTGCGCGGCGCACTCGGGGCCGGCCTTGCCGGCGCGCTGCCGGCCGCCGCCGGCGCGGCGGAGC
GCGTCGCCTTCAAGTCCGACCCGTTCACGCTCGGGATCGCGTCGGGTGATCCGGCGCCCGACGGCTTCGTGCTGTGGACC
CGACTGGCGCCGGAGCCGCTCGAGGCACGTGGCGGCATGACGCCCGCGCCGGTCGAGGTCACCGTCGAGATCGCCGACGA
TGCGGCGATGGCGCGCGTGATACGCACCGTCACGGCCACCGCCCGGCTCGAACTCGCGCACGCGGTCCATGCCGAAATCG
AAGGCCTCGCCCCGGGGCGCGATTACTTCTATCGCTTCCGCGCCGGCGACGCCGAAAGCCCGATCGGCCGCGCCCGCACC
CTGCCCGCGCCCGGCGAGACGCCGGCGCGGCTGCGTTTCGCTGCGGCCGGCTGCCAGCGCTGGGAAGGCGGTTACTACAC
CGCCTGGCGGGCGATCGCCGACGATCAGCTCGACTTCGTATTCCACTACGGCGACTACATCTACGAATATGCCTTCGCGG
CGCACGACAGGGACGGCAAGCCCTACCCGCGCACGATGCCGCCGGACTTTCCGGTCTGCTTCACGTTGACCGACTATCGC
CGCCGCTACGCGCTGTACAAGGGCGACCCGGACCTGCAGGCGGCGCACGCCTCCTGTCCGTTCCTGTCGAGTTTCGACGA
CCACGATGTCGTCAACAACTGGGCCGCCGACAGCGACCCGAAGCAGACCCCGCCCGACGCCTTTCTGTTCCGCCGGGCGA
TGGCGCTGCAGGCCTGGTACGAGCATATGCCGGTGCGCCGCGCGCAGCTCCCGCGCGGCCCCGACGTGCGCGCCTATCGC
GGCTTCCGTTTCGGCACACTCGCCGACATCGCCGTGCTCGACACGAGGCAGTATCGCTCGCGCCAGCCCTGCGGCGACGG
CTTCCGCGCGCATTGCGACGAGGCCGATGCGGCCGGTCGCACCATGCTCGGCGCAGCGCAGGAGCAGTGGCTGGCGCAGC
GGCTGAAGCAGAGCAAAGCGACCTGGCAGGTACTGGCGCAGCAAGTGCAGTTCGCGCCGTTCGACTGGCGCGGCTTTCCG
TTCGTCAAGGAGACCGACGCGCCGGTACTCGATCTCGACACCTGGAGCGGCGCCAGCGCCGCGCGCGACCGCGTGACGGC
GATGCTCGCCGAAGCGAACATCGCCAATCCGGTGGTGCTGACCGGCGACCTGCACCGGGCGATGGCGCTGGACTTGCGCC
GCGACTGGCGCGATCCCGACTCGCCGCGCATCGGCGTCGAATTCCTGTCGACCTCGATCTCGTCGCCCGGTGACGGCCCG
GCGACGGCCGAGAAGCTGGCGGCGCTGTATCGCAACAACCCGCATCTGAAATTCTTCAGCGACCGGCGCGGCTACACCCG
CCACACCGTGACGCCGGCGCGCTGGCAGGCCGATTTCCGCACGGTGGACAGCGTCGCGACCCGCGGAGAGCCGGTCACAA
CCGCCCAAACCCTGATGGTCGAAGCCGGCCGGGGCTGA

Upstream 100 bases:

>100_bases
GCGCTGCCGCCCATTGGGCTGGCCCCGACCATGCCGGCTGAGTAGGTTGTCGCCGCGCGTTCACGTGGCCGAGTTCACTT
GCCGCACCTCAGATCCGCCG

Downstream 100 bases:

>100_bases
TCGGCAACTGAGCCCTGCCGGCCGTGCCGGCATTGCGGCGCCCCCGAGCCATCGCACTGGTCAGGCCGCGGCCGACCGCG
TAGTCTGGCGCCCGCACCGG

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MHDVPAATACRMVPSMSPHPPSSGLAFDRRMLLRGALGAGLAGALPAAAGAAERVAFKSDPFTLGIASGDPAPDGFVLWT
RLAPEPLEARGGMTPAPVEVTVEIADDAAMARVIRTVTATARLELAHAVHAEIEGLAPGRDYFYRFRAGDAESPIGRART
LPAPGETPARLRFAAAGCQRWEGGYYTAWRAIADDQLDFVFHYGDYIYEYAFAAHDRDGKPYPRTMPPDFPVCFTLTDYR
RRYALYKGDPDLQAAHASCPFLSSFDDHDVVNNWAADSDPKQTPPDAFLFRRAMALQAWYEHMPVRRAQLPRGPDVRAYR
GFRFGTLADIAVLDTRQYRSRQPCGDGFRAHCDEADAAGRTMLGAAQEQWLAQRLKQSKATWQVLAQQVQFAPFDWRGFP
FVKETDAPVLDLDTWSGASAARDRVTAMLAEANIANPVVLTGDLHRAMALDLRRDWRDPDSPRIGVEFLSTSISSPGDGP
ATAEKLAALYRNNPHLKFFSDRRGYTRHTVTPARWQADFRTVDSVATRGEPVTTAQTLMVEAGRG

Sequences:

>Translated_545_residues
MHDVPAATACRMVPSMSPHPPSSGLAFDRRMLLRGALGAGLAGALPAAAGAAERVAFKSDPFTLGIASGDPAPDGFVLWT
RLAPEPLEARGGMTPAPVEVTVEIADDAAMARVIRTVTATARLELAHAVHAEIEGLAPGRDYFYRFRAGDAESPIGRART
LPAPGETPARLRFAAAGCQRWEGGYYTAWRAIADDQLDFVFHYGDYIYEYAFAAHDRDGKPYPRTMPPDFPVCFTLTDYR
RRYALYKGDPDLQAAHASCPFLSSFDDHDVVNNWAADSDPKQTPPDAFLFRRAMALQAWYEHMPVRRAQLPRGPDVRAYR
GFRFGTLADIAVLDTRQYRSRQPCGDGFRAHCDEADAAGRTMLGAAQEQWLAQRLKQSKATWQVLAQQVQFAPFDWRGFP
FVKETDAPVLDLDTWSGASAARDRVTAMLAEANIANPVVLTGDLHRAMALDLRRDWRDPDSPRIGVEFLSTSISSPGDGP
ATAEKLAALYRNNPHLKFFSDRRGYTRHTVTPARWQADFRTVDSVATRGEPVTTAQTLMVEAGRG
>Mature_545_residues
MHDVPAATACRMVPSMSPHPPSSGLAFDRRMLLRGALGAGLAGALPAAAGAAERVAFKSDPFTLGIASGDPAPDGFVLWT
RLAPEPLEARGGMTPAPVEVTVEIADDAAMARVIRTVTATARLELAHAVHAEIEGLAPGRDYFYRFRAGDAESPIGRART
LPAPGETPARLRFAAAGCQRWEGGYYTAWRAIADDQLDFVFHYGDYIYEYAFAAHDRDGKPYPRTMPPDFPVCFTLTDYR
RRYALYKGDPDLQAAHASCPFLSSFDDHDVVNNWAADSDPKQTPPDAFLFRRAMALQAWYEHMPVRRAQLPRGPDVRAYR
GFRFGTLADIAVLDTRQYRSRQPCGDGFRAHCDEADAAGRTMLGAAQEQWLAQRLKQSKATWQVLAQQVQFAPFDWRGFP
FVKETDAPVLDLDTWSGASAARDRVTAMLAEANIANPVVLTGDLHRAMALDLRRDWRDPDSPRIGVEFLSTSISSPGDGP
ATAEKLAALYRNNPHLKFFSDRRGYTRHTVTPARWQADFRTVDSVATRGEPVTTAQTLMVEAGRG

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 60015; Mature: 60015

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDVPAATACRMVPSMSPHPPSSGLAFDRRMLLRGALGAGLAGALPAAAGAAERVAFKSD
CCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHEEECCC
PFTLGIASGDPAPDGFVLWTRLAPEPLEARGGMTPAPVEVTVEIADDAAMARVIRTVTAT
CEEEEECCCCCCCCCEEEEEECCCCCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
ARLELAHAVHAEIEGLAPGRDYFYRFRAGDAESPIGRARTLPAPGETPARLRFAAAGCQR
HHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHH
WEGGYYTAWRAIADDQLDFVFHYGDYIYEYAFAAHDRDGKPYPRTMPPDFPVCFTLTDYR
CCCCEEEEEHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHH
RRYALYKGDPDLQAAHASCPFLSSFDDHDVVNNWAADSDPKQTPPDAFLFRRAMALQAWY
HHEEEECCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EHMPVRRAQLPRGPDVRAYRGFRFGTLADIAVLDTRQYRSRQPCGDGFRAHCDEADAAGR
HHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHEECCHHHHCCCCCCCCHHHCCCCCCCCCC
TMLGAAQEQWLAQRLKQSKATWQVLAQQVQFAPFDWRGFPFVKETDAPVLDLDTWSGASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCCCHH
ARDRVTAMLAEANIANPVVLTGDLHRAMALDLRRDWRDPDSPRIGVEFLSTSISSPGDGP
HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
ATAEKLAALYRNNPHLKFFSDRRGYTRHTVTPARWQADFRTVDSVATRGEPVTTAQTLMV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEE
EAGRG
ECCCC
>Mature Secondary Structure
MHDVPAATACRMVPSMSPHPPSSGLAFDRRMLLRGALGAGLAGALPAAAGAAERVAFKSD
CCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHEEECCC
PFTLGIASGDPAPDGFVLWTRLAPEPLEARGGMTPAPVEVTVEIADDAAMARVIRTVTAT
CEEEEECCCCCCCCCEEEEEECCCCCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
ARLELAHAVHAEIEGLAPGRDYFYRFRAGDAESPIGRARTLPAPGETPARLRFAAAGCQR
HHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHH
WEGGYYTAWRAIADDQLDFVFHYGDYIYEYAFAAHDRDGKPYPRTMPPDFPVCFTLTDYR
CCCCEEEEEHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHH
RRYALYKGDPDLQAAHASCPFLSSFDDHDVVNNWAADSDPKQTPPDAFLFRRAMALQAWY
HHEEEECCCCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EHMPVRRAQLPRGPDVRAYRGFRFGTLADIAVLDTRQYRSRQPCGDGFRAHCDEADAAGR
HHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHEECCHHHHCCCCCCCCHHHCCCCCCCCCC
TMLGAAQEQWLAQRLKQSKATWQVLAQQVQFAPFDWRGFPFVKETDAPVLDLDTWSGASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEECCCCCCHH
ARDRVTAMLAEANIANPVVLTGDLHRAMALDLRRDWRDPDSPRIGVEFLSTSISSPGDGP
HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
ATAEKLAALYRNNPHLKFFSDRRGYTRHTVTPARWQADFRTVDSVATRGEPVTTAQTLMV
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEE
EAGRG
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]