| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751436
Identifier: 86751436
GI number: 86751436
Start: 4919634
End: 4920641
Strand: Direct
Name: 86751436
Synonym: RPB_4334
Alternate gene names: NA
Gene position: 4919634-4920641 (Clockwise)
Preceding gene: 86751435
Following gene: 86751437
Centisome position: 92.27
GC content: 67.76
Gene sequence:
>1008_bases ATGCCGTCTTCGACCCGCCCGCCGTTCCGACCCGACCGCCGGACCATCTTGCGCGGCGCCGCAGCGCTCGGCGCGCTGCC GCTGCTGCCCGGCATCGCCCGCGCCGACAGCTGGCCGAGCCGGCCGGTGAAGTTCATCGTGCCGTTCGCGGCCGGCGGCA CCACCGACATTCTGGCGCGGCTGGTGGCGCAGAAGATGTCGGAGGAGTACGGCCAGCAATTCATCGTCGAAAATAAGGCC GGCGCCGGCGGCAACATCGCCGCCGACTTCGTCGCCAAGGCGGATCCCGACGGCTACACCTTCATCGTCGGCACGCCGGG CACGCACGCCATCAATCAGTTCGTGTTCAAGTCGCTGAGCTACGATCAGGCCAAGGACATCGCGCCGGTGATCGTCATCG CCAAGGTGCCGAACCTGTGCTCGGTGACCAATGCGCTGCCGGTGAAGAGCGTCGCCGAACTGATCGCCTACGCCAAGTCG AAGCCGGGCGAAATATTCTACGGCACACCCGGCCTCGGCTCGACCGCGCATGTCTCGATCGAGCTGTTCAAGTCGATGAC CGGCGCGCCGATGACGCATGTGCCCTACAAGGGCTCGGCGCCGATGCTGACCGACCTGATCGCCGGCCGCGTGCATTTCA CCATCGACAATCTGCCGGCGTCGCAACCCCACGCCGACGGCGGAACGATCCGCGCGCTCGCGGTCTCGACCGCGACGCGA TGGCCGCTGCTGCCGGACCTGCCGACCATCGCCGAGGCCGGCGTGCCCGGCTACGACGCCGCGGCGTGGTTCACGATCGG CGCGCCCGCGAAGATTTCGCCGGACATCGTCGCCAGGCTCAACGCCAGCGTCGACAAATTCATCAAGACCGAGGAGGGCA CCGCGCGGCTGCGCAAGCTCGGCGCCGATCCGGTCGGCGGTTCGCCCGCGGACATGCAGCGCTTCGTGCTCGCCGAAACC GAAAAATGGGGCAAGGTCGCGAAGTTCGCCAAGATCGAGCCGCAGTAA
Upstream 100 bases:
>100_bases CGGCCGCAACTGATTGCATCGATCCAGCGCCGGCGCGCTTCGCACGCCGGCTTTTCATCGTCGTCCGCCTCCCAACGAGA GCAGTGAGAAGGAAGTCTGC
Downstream 100 bases:
>100_bases CAGCCGTCCCGCGATCGACCCACGATCATCACCTCGCGCGACGGCAAGACGCCGCCGCGTGAGGCTTCCGCCGGTCACAC GGAAGCATTGCAAAACCTCG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MPSSTRPPFRPDRRTILRGAAALGALPLLPGIARADSWPSRPVKFIVPFAAGGTTDILARLVAQKMSEEYGQQFIVENKA GAGGNIAADFVAKADPDGYTFIVGTPGTHAINQFVFKSLSYDQAKDIAPVIVIAKVPNLCSVTNALPVKSVAELIAYAKS KPGEIFYGTPGLGSTAHVSIELFKSMTGAPMTHVPYKGSAPMLTDLIAGRVHFTIDNLPASQPHADGGTIRALAVSTATR WPLLPDLPTIAEAGVPGYDAAAWFTIGAPAKISPDIVARLNASVDKFIKTEEGTARLRKLGADPVGGSPADMQRFVLAET EKWGKVAKFAKIEPQ
Sequences:
>Translated_335_residues MPSSTRPPFRPDRRTILRGAAALGALPLLPGIARADSWPSRPVKFIVPFAAGGTTDILARLVAQKMSEEYGQQFIVENKA GAGGNIAADFVAKADPDGYTFIVGTPGTHAINQFVFKSLSYDQAKDIAPVIVIAKVPNLCSVTNALPVKSVAELIAYAKS KPGEIFYGTPGLGSTAHVSIELFKSMTGAPMTHVPYKGSAPMLTDLIAGRVHFTIDNLPASQPHADGGTIRALAVSTATR WPLLPDLPTIAEAGVPGYDAAAWFTIGAPAKISPDIVARLNASVDKFIKTEEGTARLRKLGADPVGGSPADMQRFVLAET EKWGKVAKFAKIEPQ >Mature_334_residues PSSTRPPFRPDRRTILRGAAALGALPLLPGIARADSWPSRPVKFIVPFAAGGTTDILARLVAQKMSEEYGQQFIVENKAG AGGNIAADFVAKADPDGYTFIVGTPGTHAINQFVFKSLSYDQAKDIAPVIVIAKVPNLCSVTNALPVKSVAELIAYAKSK PGEIFYGTPGLGSTAHVSIELFKSMTGAPMTHVPYKGSAPMLTDLIAGRVHFTIDNLPASQPHADGGTIRALAVSTATRW PLLPDLPTIAEAGVPGYDAAAWFTIGAPAKISPDIVARLNASVDKFIKTEEGTARLRKLGADPVGGSPADMQRFVLAETE KWGKVAKFAKIEPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35382; Mature: 35251
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSTRPPFRPDRRTILRGAAALGALPLLPGIARADSWPSRPVKFIVPFAAGGTTDILAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHH LVAQKMSEEYGQQFIVENKAGAGGNIAADFVAKADPDGYTFIVGTPGTHAINQFVFKSLS HHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCC YDQAKDIAPVIVIAKVPNLCSVTNALPVKSVAELIAYAKSKPGEIFYGTPGLGSTAHVSI HHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHH ELFKSMTGAPMTHVPYKGSAPMLTDLIAGRVHFTIDNLPASQPHADGGTIRALAVSTATR HHHHHHCCCCCEECCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCC WPLLPDLPTIAEAGVPGYDAAAWFTIGAPAKISPDIVARLNASVDKFIKTEEGTARLRKL CCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GADPVGGSPADMQRFVLAETEKWGKVAKFAKIEPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSSTRPPFRPDRRTILRGAAALGALPLLPGIARADSWPSRPVKFIVPFAAGGTTDILAR CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHH LVAQKMSEEYGQQFIVENKAGAGGNIAADFVAKADPDGYTFIVGTPGTHAINQFVFKSLS HHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCC YDQAKDIAPVIVIAKVPNLCSVTNALPVKSVAELIAYAKSKPGEIFYGTPGLGSTAHVSI HHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHH ELFKSMTGAPMTHVPYKGSAPMLTDLIAGRVHFTIDNLPASQPHADGGTIRALAVSTATR HHHHHHCCCCCEECCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCC WPLLPDLPTIAEAGVPGYDAAAWFTIGAPAKISPDIVARLNASVDKFIKTEEGTARLRKL CCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GADPVGGSPADMQRFVLAETEKWGKVAKFAKIEPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]