| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is hisC
Identifier: 86751357
GI number: 86751357
Start: 4840376
End: 4841473
Strand: Direct
Name: hisC
Synonym: RPB_4254
Alternate gene names: 86751357
Gene position: 4840376-4841473 (Clockwise)
Preceding gene: 86751356
Following gene: 86751358
Centisome position: 90.79
GC content: 65.94
Gene sequence:
>1098_bases ATGTCCCGTCCCGTGCCGAAGCCCGGCATTCTCGATATTGCGCCCTACACCCCCGGCAAGAGCCCCGTGCCCGAAGCCGG CCGCAAGGTGTTCAAGCTCTCGGCCAACGAAACCCCGTTCGGCCCGTCGCCGCACGCGATCGCGGCCTATAAGAGCGCGG CGGATCATCTCGAGGATTATCCGGAGGGCACCTCGCGGGTGCTGCGCGAGGCGATCGGCCGTGCCTACGGCCTCGACCCC GACCGCATCATCTGCGGCGCCGGCTCCGACGAAATCCTGAACCTGTTGGCGCACACTTATCTCGGCCCCGGCGACGAGGC GATCTCGTCGCAGCACGGCTTCCTGGTCTATCCGATCGCCACGCTGGCGAACGGCGCCACCAACGTGGTCGCGCCGGAAA AGGACCTGACGACCGACGTCGACGCGATCCTCAGCAAGGTCACGCCGAACACCAAGCTGGTGTGGCTCGCCAACCCGAAC AACCCGACCGGGACCTATATTCCGTTCGACGAGGTCAAGCGGCTGCGCGCCGGCCTGCCCTCGCACGTCGTGCTGGTCCT CGACGCCGCCTATGCCGACTACGTCTCGAAGAACGACTACGAGATCGGCATCGAACTGGTCTCGACCACCGACAACACCG TGCTGACCCACACCTTCTCCAAGGTGCACGGCCTCGCGAGCTTGCGGATCGGCTGGATGTTCGGCCCGGCGAATATTGTG GACGCGGTCAACCGCATCCGCGGTCCGTTCAACACGTCGATCCCGGCGCAGCTCGCCGCGGTCGCGGCGATCCAGGACAC CGCGCATGTCGACATGTCGCGCGTCCACACCGAGAAGTGGCGCGACCGACTGACCGAGGAGTTCACCAAACTCGGCCTGA CAGTGACGCCGAGCGTCTGCAATTTCGTGCTGATGCATTTCCCGACCACGGCGGGCAAGACCGCGGCGGATGCCGACGCG TTCCTGACCAAGCGCGGTCTCGTGCTGCGCGCGCTCGGCAATTACAAGCTGCCGCACGCGCTGCGCATGACCATCGGCAC CGACGAGGCCAACGAGCTGGTAATCGCGGCGCTGACCGAGTTCATGGCGAAGCCATGA
Upstream 100 bases:
>100_bases CCTCGTCGGCAGCCACGCGAGGCGCTATACGGTGCCCCCGAGCGGCAAGGCCCCGACCTGAAGGACCGGCCTGCAGCCGC CTGACACTCCGGAGTTGACG
Downstream 100 bases:
>100_bases CCGCGCCGCTGTTTCAACGGCTGGCGCTGATCGGCTTCGGCCTGATCGGCGGCTCGATCGCACGCGGCGCGCGGCTGCAG GGTCTCGCGGGCGAGATCGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSRPVPKPGILDIAPYTPGKSPVPEAGRKVFKLSANETPFGPSPHAIAAYKSAADHLEDYPEGTSRVLREAIGRAYGLDP DRIICGAGSDEILNLLAHTYLGPGDEAISSQHGFLVYPIATLANGATNVVAPEKDLTTDVDAILSKVTPNTKLVWLANPN NPTGTYIPFDEVKRLRAGLPSHVVLVLDAAYADYVSKNDYEIGIELVSTTDNTVLTHTFSKVHGLASLRIGWMFGPANIV DAVNRIRGPFNTSIPAQLAAVAAIQDTAHVDMSRVHTEKWRDRLTEEFTKLGLTVTPSVCNFVLMHFPTTAGKTAADADA FLTKRGLVLRALGNYKLPHALRMTIGTDEANELVIAALTEFMAKP
Sequences:
>Translated_365_residues MSRPVPKPGILDIAPYTPGKSPVPEAGRKVFKLSANETPFGPSPHAIAAYKSAADHLEDYPEGTSRVLREAIGRAYGLDP DRIICGAGSDEILNLLAHTYLGPGDEAISSQHGFLVYPIATLANGATNVVAPEKDLTTDVDAILSKVTPNTKLVWLANPN NPTGTYIPFDEVKRLRAGLPSHVVLVLDAAYADYVSKNDYEIGIELVSTTDNTVLTHTFSKVHGLASLRIGWMFGPANIV DAVNRIRGPFNTSIPAQLAAVAAIQDTAHVDMSRVHTEKWRDRLTEEFTKLGLTVTPSVCNFVLMHFPTTAGKTAADADA FLTKRGLVLRALGNYKLPHALRMTIGTDEANELVIAALTEFMAKP >Mature_364_residues SRPVPKPGILDIAPYTPGKSPVPEAGRKVFKLSANETPFGPSPHAIAAYKSAADHLEDYPEGTSRVLREAIGRAYGLDPD RIICGAGSDEILNLLAHTYLGPGDEAISSQHGFLVYPIATLANGATNVVAPEKDLTTDVDAILSKVTPNTKLVWLANPNN PTGTYIPFDEVKRLRAGLPSHVVLVLDAAYADYVSKNDYEIGIELVSTTDNTVLTHTFSKVHGLASLRIGWMFGPANIVD AVNRIRGPFNTSIPAQLAAVAAIQDTAHVDMSRVHTEKWRDRLTEEFTKLGLTVTPSVCNFVLMHFPTTAGKTAADADAF LTKRGLVLRALGNYKLPHALRMTIGTDEANELVIAALTEFMAKP
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=352, Percent_Identity=24.1477272727273, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788722, Length=284, Percent_Identity=27.4647887323944, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6322075, Length=391, Percent_Identity=26.0869565217391, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_RHOP2 (Q2IS68)
Other databases:
- EMBL: CP000250 - RefSeq: YP_487853.1 - ProteinModelPortal: Q2IS68 - SMR: Q2IS68 - STRING: Q2IS68 - GeneID: 3912067 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_4254 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: YDIAARR - ProtClustDB: PRK02731 - BioCyc: RPAL316058:RPB_4254-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39330; Mature: 39199
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPVPKPGILDIAPYTPGKSPVPEAGRKVFKLSANETPFGPSPHAIAAYKSAADHLEDY CCCCCCCCCEEEECCCCCCCCCCCHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC PEGTSRVLREAIGRAYGLDPDRIICGAGSDEILNLLAHTYLGPGDEAISSQHGFLVYPIA CCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEHH TLANGATNVVAPEKDLTTDVDAILSKVTPNTKLVWLANPNNPTGTYIPFDEVKRLRAGLP HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC SHVVLVLDAAYADYVSKNDYEIGIELVSTTDNTVLTHTFSKVHGLASLRIGWMFGPANIV CEEEEEEEHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHEEEEEEECCHHHH DAVNRIRGPFNTSIPAQLAAVAAIQDTAHVDMSRVHTEKWRDRLTEEFTKLGLTVTPSVC HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHH NFVLMHFPTTAGKTAADADAFLTKRGLVLRALGNYKLPHALRMTIGTDEANELVIAALTE HHHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHH FMAKP HHCCC >Mature Secondary Structure SRPVPKPGILDIAPYTPGKSPVPEAGRKVFKLSANETPFGPSPHAIAAYKSAADHLEDY CCCCCCCCEEEECCCCCCCCCCCHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC PEGTSRVLREAIGRAYGLDPDRIICGAGSDEILNLLAHTYLGPGDEAISSQHGFLVYPIA CCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEHH TLANGATNVVAPEKDLTTDVDAILSKVTPNTKLVWLANPNNPTGTYIPFDEVKRLRAGLP HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC SHVVLVLDAAYADYVSKNDYEIGIELVSTTDNTVLTHTFSKVHGLASLRIGWMFGPANIV CEEEEEEEHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHEEEEEEECCHHHH DAVNRIRGPFNTSIPAQLAAVAAIQDTAHVDMSRVHTEKWRDRLTEEFTKLGLTVTPSVC HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHH NFVLMHFPTTAGKTAADADAFLTKRGLVLRALGNYKLPHALRMTIGTDEANELVIAALTE HHHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHH FMAKP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA