| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is tyrC [H]
Identifier: 86751358
GI number: 86751358
Start: 4841470
End: 4842411
Strand: Direct
Name: tyrC [H]
Synonym: RPB_4255
Alternate gene names: 86751358
Gene position: 4841470-4842411 (Clockwise)
Preceding gene: 86751357
Following gene: 86751360
Centisome position: 90.81
GC content: 68.05
Gene sequence:
>942_bases ATGACCGCGCCGCTGTTTCAACGGCTGGCGCTGATCGGCTTCGGCCTGATCGGCGGCTCGATCGCACGCGGCGCGCGGCT GCAGGGTCTCGCGGGCGAGATCGTCGCGACCGCGCGTTCGGCGGGGTCGCGGGCGCGCGTCGCCGAGCTGGGAGTCGTCG ACCGCGTGGTCGAGACCAATGCCGAGGCGGTGAAGGACGCCGATCTCGTCATCCTGTGCATCCCGGTCGGCGCCTGCGGC GAGGCCGCGCAGGAGATCGCGGCCCATCTCGCGCCGGGCGCGATCGTCTCCGATGTCGGTTCGGTCAAGGCCGCGGTCGT CAAGGCGATGGCCGAGCATCTGCCGCCGAACGTGCACTTCGTGCCGGCGCATCCGGTCGCCGGCACCGAGAATTCCGGCC CGGATTCCGGCTTCGCCGAACTGTTCATCAACCGCTGGTGCATTCTGACGCCGCCGGAGGGCACCAATGCCGACGCGACC GACAAGCTCGGCGCGTTCTGGCGTGGGCTTGGCGCCAATGTCGAGATCATGACGCCGGAGCATCACGACAAGGTGCTGGC GGTGACCAGCCACCTGCCGCATCTGATCGCCTATACCATCGTCTCGACCGCGCAGGAGCTGGAGGGCGTGACCAGTTCGG AAGTGCTGAAATTCTCCGCCGGCGGCTTTCGCGACTTCACCCGCATCGCCGCGTCCGACCCGACGATGTGGCGCGACGTG TTCCTCAACAACAAGGACGCGGTGCTGGAGATGCTCGGCGAATTCCAGGAGGATCTGTCGAAGCTGACCCGGGCGATCCG CCGCGGCGACGGCGAAGCCTTGTTCGACCATTTCACCCGCACCCGCGCGATTCGCCGCGGCATCGTCGAGATCGGTCAGG ACGAGGCCGCCGCCGATTTCGGCCGTAAGCATCCGCAATTGGGCAAGACCGCGGCGGAGTGA
Upstream 100 bases:
>100_bases TCGGCAATTACAAGCTGCCGCACGCGCTGCGCATGACCATCGGCACCGACGAGGCCAACGAGCTGGTAATCGCGGCGCTG ACCGAGTTCATGGCGAAGCC
Downstream 100 bases:
>100_bases GCGGCGGGGATGGGCGCGGCCCCACCCGTCAGGCATCTGCGACGGCGCGCGCGACGCACGTCACCCGCCGTGGTCACGCT GAGGCGACGACGGCGGGTGA
Product: cyclohexadienyl dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTAPLFQRLALIGFGLIGGSIARGARLQGLAGEIVATARSAGSRARVAELGVVDRVVETNAEAVKDADLVILCIPVGACG EAAQEIAAHLAPGAIVSDVGSVKAAVVKAMAEHLPPNVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGTNADAT DKLGAFWRGLGANVEIMTPEHHDKVLAVTSHLPHLIAYTIVSTAQELEGVTSSEVLKFSAGGFRDFTRIAASDPTMWRDV FLNNKDAVLEMLGEFQEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVEIGQDEAAADFGRKHPQLGKTAAE
Sequences:
>Translated_313_residues MTAPLFQRLALIGFGLIGGSIARGARLQGLAGEIVATARSAGSRARVAELGVVDRVVETNAEAVKDADLVILCIPVGACG EAAQEIAAHLAPGAIVSDVGSVKAAVVKAMAEHLPPNVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGTNADAT DKLGAFWRGLGANVEIMTPEHHDKVLAVTSHLPHLIAYTIVSTAQELEGVTSSEVLKFSAGGFRDFTRIAASDPTMWRDV FLNNKDAVLEMLGEFQEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVEIGQDEAAADFGRKHPQLGKTAAE >Mature_312_residues TAPLFQRLALIGFGLIGGSIARGARLQGLAGEIVATARSAGSRARVAELGVVDRVVETNAEAVKDADLVILCIPVGACGE AAQEIAAHLAPGAIVSDVGSVKAAVVKAMAEHLPPNVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGTNADATD KLGAFWRGLGANVEIMTPEHHDKVLAVTSHLPHLIAYTIVSTAQELEGVTSSEVLKFSAGGFRDFTRIAASDPTMWRDVF LNNKDAVLEMLGEFQEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVEIGQDEAAADFGRKHPQLGKTAAE
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 33199; Mature: 33068
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLFQRLALIGFGLIGGSIARGARLQGLAGEIVATARSAGSRARVAELGVVDRVVETN CCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC AEAVKDADLVILCIPVGACGEAAQEIAAHLAPGAIVSDVGSVKAAVVKAMAEHLPPNVHF HHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VPAHPVAGTENSGPDSGFAELFINRWCILTPPEGTNADATDKLGAFWRGLGANVEIMTPE EECCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCC HHDKVLAVTSHLPHLIAYTIVSTAQELEGVTSSEVLKFSAGGFRDFTRIAASDPTMWRDV CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHCCCCCHHHHH FLNNKDAVLEMLGEFQEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVEIGQDEAAADF HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GRKHPQLGKTAAE HCCCCCCCCCCCC >Mature Secondary Structure TAPLFQRLALIGFGLIGGSIARGARLQGLAGEIVATARSAGSRARVAELGVVDRVVETN CCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC AEAVKDADLVILCIPVGACGEAAQEIAAHLAPGAIVSDVGSVKAAVVKAMAEHLPPNVHF HHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VPAHPVAGTENSGPDSGFAELFINRWCILTPPEGTNADATDKLGAFWRGLGANVEIMTPE EECCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCC HHDKVLAVTSHLPHLIAYTIVSTAQELEGVTSSEVLKFSAGGFRDFTRIAASDPTMWRDV CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHHHHHCCCCCHHHHH FLNNKDAVLEMLGEFQEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVEIGQDEAAADF HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GRKHPQLGKTAAE HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]