Click here to switch to the map view.

The map label for this gene is 86751325

Identifier: 86751325

GI number: 86751325

Start: 4792596

End: 4793213

Strand: Reverse

Name: 86751325

Synonym: RPB_4219

Alternate gene names: NA

Gene position: 4793213-4792596 (Counterclockwise)

Preceding gene: 86751326

Following gene: 86751324

Centisome position: 89.9

GC content: 64.4

Gene sequence:

>618_bases
GTGACCGACCTGCACTCCTACGAACCCTCCAACGGCCATGGCCTCAAGCACGATCCGTTCAACGCCATCATCGCGCCGCG
GCCGATCGGCTGGATTTCGTCCTGCGACGCCGAGGGCCACGTCAACCTCGCGCCTTACAGTTTCTTCAATGCCTTCAACT
ACACGCCGCCGCTGATCGGCTTCTCCTCGACGGAGCGGAAGGACACCGTTGCCAACATCGAGCAGACCGGCGAATTCGTC
TGGAATCTGGTGACGATGGATCTGGCTCATGCGATGAATGCGACGGCCGCGACGGTTCCCCCTGAGGTCGACGAGTTCGA
ATTGGGCAAGCTCACCAAGCTGCCGAGCCGCCTGGTGAAGCCGCCGCGCGTCGCCGAGAGCCCGGTGTCGTTCGAATGCC
GGATGTCCGACATTATCCAACTCAAGGCCGCCGACGGCACCAGGACCGATGCCTGGCTGACGATCGGCGAGGTCGTCGCG
GTGCACATCGACAAGCGGCTGATCAAGGACGGCGTCTATCAGACCGCACTGGCCCGCCCGATCGTCCGCGCCGGCCGTCG
CGGCGACTATTTCGAGATCCGGCCCGACGCGATGTTCGAGATGCCGCGCCCCGCCTGA

Upstream 100 bases:

>100_bases
CCACAAGGACGGGCCGACGCCCGATCAAATGATCGACTTCGTGCTGGCCGGGCTTGGTGCTAAGAGACGGGCGATATCCC
CCTAGCGCCGAGGCGACTGC

Downstream 100 bases:

>100_bases
CGCGCTGCAGCAATGCCTGTCGACGCCGCCTCCGCCCAGCCGAATTGACCTGCGGCGCGAACGCTCGCACGATGGAGCAA
ATCGCCTCGGGTGTTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDLHSYEPSNGHGLKHDPFNAIIAPRPIGWISSCDAEGHVNLAPYSFFNAFNYTPPLIGFSSTERKDTVANIEQTGEFV
WNLVTMDLAHAMNATAATVPPEVDEFELGKLTKLPSRLVKPPRVAESPVSFECRMSDIIQLKAADGTRTDAWLTIGEVVA
VHIDKRLIKDGVYQTALARPIVRAGRRGDYFEIRPDAMFEMPRPA

Sequences:

>Translated_205_residues
MTDLHSYEPSNGHGLKHDPFNAIIAPRPIGWISSCDAEGHVNLAPYSFFNAFNYTPPLIGFSSTERKDTVANIEQTGEFV
WNLVTMDLAHAMNATAATVPPEVDEFELGKLTKLPSRLVKPPRVAESPVSFECRMSDIIQLKAADGTRTDAWLTIGEVVA
VHIDKRLIKDGVYQTALARPIVRAGRRGDYFEIRPDAMFEMPRPA
>Mature_204_residues
TDLHSYEPSNGHGLKHDPFNAIIAPRPIGWISSCDAEGHVNLAPYSFFNAFNYTPPLIGFSSTERKDTVANIEQTGEFVW
NLVTMDLAHAMNATAATVPPEVDEFELGKLTKLPSRLVKPPRVAESPVSFECRMSDIIQLKAADGTRTDAWLTIGEVVAV
HIDKRLIKDGVYQTALARPIVRAGRRGDYFEIRPDAMFEMPRPA

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22752; Mature: 22621

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLHSYEPSNGHGLKHDPFNAIIAPRPIGWISSCDAEGHVNLAPYSFFNAFNYTPPLIG
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEECCHHHHHCCCCCCCCCC
FSSTERKDTVANIEQTGEFVWNLVTMDLAHAMNATAATVPPEVDEFELGKLTKLPSRLVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PPRVAESPVSFECRMSDIIQLKAADGTRTDAWLTIGEVVAVHIDKRLIKDGVYQTALARP
CCCCCCCCCCEEEECCCEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRAGRRGDYFEIRPDAMFEMPRPA
HHHCCCCCCEEEECCCHHCCCCCCC
>Mature Secondary Structure 
TDLHSYEPSNGHGLKHDPFNAIIAPRPIGWISSCDAEGHVNLAPYSFFNAFNYTPPLIG
CCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEECCHHHHHCCCCCCCCCC
FSSTERKDTVANIEQTGEFVWNLVTMDLAHAMNATAATVPPEVDEFELGKLTKLPSRLVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PPRVAESPVSFECRMSDIIQLKAADGTRTDAWLTIGEVVAVHIDKRLIKDGVYQTALARP
CCCCCCCCCCEEEECCCEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
IVRAGRRGDYFEIRPDAMFEMPRPA
HHHCCCCCCEEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]