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The map label for this gene is ugpA [C]

Identifier: 86751320

GI number: 86751320

Start: 4786794

End: 4787696

Strand: Reverse

Name: ugpA [C]

Synonym: RPB_4214

Alternate gene names: 86751320

Gene position: 4787696-4786794 (Counterclockwise)

Preceding gene: 86751321

Following gene: 86751319

Centisome position: 89.8

GC content: 62.9

Gene sequence:

>903_bases
ATGGAGAAGATCGTCAACCAGAAGGCCTGGTTCCTGGTGCTGCCGGTGTTCGCCATCGTCGCGTTCTCGGCGATCCTGCC
GCTGATGACGGTGGTGAACTATTCGGTGCAGGACACCTTCGGCAACAACCAGTTCTTCTGGAACGGCGTCGGCTGGTTCA
AGGAACTGCTCGATCCCTCGACCGATCTCGGCGGCCGGTTCTTCGCCTCGCTGGGGCGCAATCTGGCGTTCTCGGCGATC
ATCCTCGCCATCGAAGTCCCGCTCGGAATCGTGGTCGCGCTGGCGATGCCGCGCCACGGCTGGTCGGTCGCGTTCTGCCT
GGTGATCATGGCGTTGCCGCTGTTGATCCCGTGGAACGTGGTCGGCACCATCTGGCAAATCTTCGGCCGGCCCGACATCG
GCCTGATGGGCTACACGCTGAACAGCCTCGGCATCAATTACAACTACGTCTCCAACGAATTCGACGCCTGGGCCACGGTG
GTGGTGATGGACGTCTGGCACTGGACCAGCCTGGTGGCGCTGCTTTGCTATGCCGGCCTGAAGTCGATCCCGGACGCCTA
TTATCAGGCGGCGCAGATCGACGGCGCGTCGCGCTGGGCGGTGTTCAAGGCGATCCAGCTGCCGAAGATGCACCGGGTGC
TGCTGATCGCCGTGCTGCTGCGGTTCATGGACAGCTTCATGATCTACACCGAACCCTTCGTCGTCACCGGCGGCGGGCCG
GGCAATTCCACGACCTTCATCTCGATCGAGCTGGTCAAGATCGCGCTCGGCCAGTTCGACCTCGGCAAAGCCGCGGCGCT
GTCGATCGTCTACAATCTGATCATCATCATCGTGTGCTGGGTGTTCTACACCGTGATGACCAACGCCGGCGCCGAGCGCC
GGCAGACCCCCGGGAGCGCCTGA

Upstream 100 bases:

>100_bases
CCGACGGCGACGAGGTCGGTCTGATGATCGAACCGTCGCGCGTCCACGTCTATGCCGACAGCGAGATCGTCGAAGGAAGC
GCGCTGGAGCAGGTCGCCTG

Downstream 100 bases:

>100_bases
TGCACTCGATCCCCGGTCGCCGCATCGTGATGGCGTGCTATCTGATCTTCCTGATGCTGCCGATCTACTGGCTCGTCAAC
ATGAGCTTCAAGACCAACGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEKIVNQKAWFLVLPVFAIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFFASLGRNLAFSAI
ILAIEVPLGIVVALAMPRHGWSVAFCLVIMALPLLIPWNVVGTIWQIFGRPDIGLMGYTLNSLGINYNYVSNEFDAWATV
VVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFKAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
GNSTTFISIELVKIALGQFDLGKAAALSIVYNLIIIIVCWVFYTVMTNAGAERRQTPGSA

Sequences:

>Translated_300_residues
MEKIVNQKAWFLVLPVFAIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFFASLGRNLAFSAI
ILAIEVPLGIVVALAMPRHGWSVAFCLVIMALPLLIPWNVVGTIWQIFGRPDIGLMGYTLNSLGINYNYVSNEFDAWATV
VVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFKAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
GNSTTFISIELVKIALGQFDLGKAAALSIVYNLIIIIVCWVFYTVMTNAGAERRQTPGSA
>Mature_300_residues
MEKIVNQKAWFLVLPVFAIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGVGWFKELLDPSTDLGGRFFASLGRNLAFSAI
ILAIEVPLGIVVALAMPRHGWSVAFCLVIMALPLLIPWNVVGTIWQIFGRPDIGLMGYTLNSLGINYNYVSNEFDAWATV
VVMDVWHWTSLVALLCYAGLKSIPDAYYQAAQIDGASRWAVFKAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
GNSTTFISIELVKIALGQFDLGKAAALSIVYNLIIIIVCWVFYTVMTNAGAERRQTPGSA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=179, Percent_Identity=30.1675977653631, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787570, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33177; Mature: 33177

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIVNQKAWFLVLPVFAIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGVGWFKELLDPS
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCHHHHHHHCCCC
TDLGGRFFASLGRNLAFSAIILAIEVPLGIVVALAMPRHGWSVAFCLVIMALPLLIPWNV
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
VGTIWQIFGRPDIGLMGYTLNSLGINYNYVSNEFDAWATVVVMDVWHWTSLVALLCYAGL
HHHHHHHHCCCCCCEEEEEHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIPDAYYQAAQIDGASRWAVFKAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
HHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCC
GNSTTFISIELVKIALGQFDLGKAAALSIVYNLIIIIVCWVFYTVMTNAGAERRQTPGSA
CCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MEKIVNQKAWFLVLPVFAIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGVGWFKELLDPS
CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCHHHHHHHCCCC
TDLGGRFFASLGRNLAFSAIILAIEVPLGIVVALAMPRHGWSVAFCLVIMALPLLIPWNV
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
VGTIWQIFGRPDIGLMGYTLNSLGINYNYVSNEFDAWATVVVMDVWHWTSLVALLCYAGL
HHHHHHHHCCCCCCEEEEEHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSIPDAYYQAAQIDGASRWAVFKAIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
HHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCC
GNSTTFISIELVKIALGQFDLGKAAALSIVYNLIIIIVCWVFYTVMTNAGAERRQTPGSA
CCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]