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The map label for this gene is ycjP [C]

Identifier: 86751319

GI number: 86751319

Start: 4785988

End: 4786794

Strand: Reverse

Name: ycjP [C]

Synonym: RPB_4213

Alternate gene names: 86751319

Gene position: 4786794-4785988 (Counterclockwise)

Preceding gene: 86751320

Following gene: 86751318

Centisome position: 89.78

GC content: 63.07

Gene sequence:

>807_bases
ATGCACTCGATCCCCGGTCGCCGCATCGTGATGGCGTGCTATCTGATCTTCCTGATGCTGCCGATCTACTGGCTCGTCAA
CATGAGCTTCAAGACCAACGGCGAGATCGTCTCGACGATGACGCTGTGGCCGCACCAGCCGACGCTGGAGAACTACCGGA
CGATCTTCACCGATCCGAGCTGGTATTCGGGCTATATCAACTCGCTGCAATACGTCGTCATCAACACCGTGCTGTCGATC
TCGTTCGCGCTGCCGGCGGCCTACGCGTTCTCGCGCTACCGCTTCCTCGGCGACAAGCATTTGTTCTTCTGGCTACTGTC
CAACCGGATGGCGCCGGCCGCGGTCTACGCGCTGCCGTTCTTCAACCTGTATTCGGCGATCAATCTGTTCGATACGCCAT
GGGCGGTGGCGCTGGCGCATTGCCTGTTCAACGTGCCGCTGGCGGTGTGGATCCTCGAGGGCTTCGTCTCCGGCGTGCCG
CGCGAGATCGACGAGACCGCGTTCCTCGACGGCTATTCGTTCCCGCGCTTCTTCGTCAAGATACTGATGCCGCTGATCGC
CAGCGGCATCGGCGTCGCGGCGTTCTTCTGCTTCATGTTCTCGTGGGTCGAACTGCTGCTGGCGCGGACGCTGACTTCGG
TCAACGCCAAGCCGATTTCCGCGGTGATGACCCGCACCGTCTCGGCCGCCGGCATGGACTGGGGCCTGCTCGCCGCCGCC
GGCGTCCTGACCATCATCCCGGGCGCGCTGGTGATCTGGTTCGTCCGCAACTACATCGCGCGCGGCTTCGCGCTCGGTCG
GGTGTGA

Upstream 100 bases:

>100_bases
CGATCGTCTACAATCTGATCATCATCATCGTGTGCTGGGTGTTCTACACCGTGATGACCAACGCCGGCGCCGAGCGCCGG
CAGACCCCCGGGAGCGCCTG

Downstream 100 bases:

>100_bases
GGATTTGAAATGATAGACCGACGCCGTCATTGCGAGGAGCGAAGCGACGACGCAATCCAGCTCCGTGCACTGCGCCCTGG
ATTGCTTCGCTTCGCTCGCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MHSIPGRRIVMACYLIFLMLPIYWLVNMSFKTNGEIVSTMTLWPHQPTLENYRTIFTDPSWYSGYINSLQYVVINTVLSI
SFALPAAYAFSRYRFLGDKHLFFWLLSNRMAPAAVYALPFFNLYSAINLFDTPWAVALAHCLFNVPLAVWILEGFVSGVP
REIDETAFLDGYSFPRFFVKILMPLIASGIGVAAFFCFMFSWVELLLARTLTSVNAKPISAVMTRTVSAAGMDWGLLAAA
GVLTIIPGALVIWFVRNYIARGFALGRV

Sequences:

>Translated_268_residues
MHSIPGRRIVMACYLIFLMLPIYWLVNMSFKTNGEIVSTMTLWPHQPTLENYRTIFTDPSWYSGYINSLQYVVINTVLSI
SFALPAAYAFSRYRFLGDKHLFFWLLSNRMAPAAVYALPFFNLYSAINLFDTPWAVALAHCLFNVPLAVWILEGFVSGVP
REIDETAFLDGYSFPRFFVKILMPLIASGIGVAAFFCFMFSWVELLLARTLTSVNAKPISAVMTRTVSAAGMDWGLLAAA
GVLTIIPGALVIWFVRNYIARGFALGRV
>Mature_268_residues
MHSIPGRRIVMACYLIFLMLPIYWLVNMSFKTNGEIVSTMTLWPHQPTLENYRTIFTDPSWYSGYINSLQYVVINTVLSI
SFALPAAYAFSRYRFLGDKHLFFWLLSNRMAPAAVYALPFFNLYSAINLFDTPWAVALAHCLFNVPLAVWILEGFVSGVP
REIDETAFLDGYSFPRFFVKILMPLIASGIGVAAFFCFMFSWVELLLARTLTSVNAKPISAVMTRTVSAAGMDWGLLAAA
GVLTIIPGALVIWFVRNYIARGFALGRV

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=262, Percent_Identity=27.4809160305344, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=25.3588516746411, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30149; Mature: 30149

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIPGRRIVMACYLIFLMLPIYWLVNMSFKTNGEIVSTMTLWPHQPTLENYRTIFTDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHCEEEECCCC
WYSGYINSLQYVVINTVLSISFALPAAYAFSRYRFLGDKHLFFWLLSNRMAPAAVYALPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
FNLYSAINLFDTPWAVALAHCLFNVPLAVWILEGFVSGVPREIDETAFLDGYSFPRFFVK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
ILMPLIASGIGVAAFFCFMFSWVELLLARTLTSVNAKPISAVMTRTVSAAGMDWGLLAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
GVLTIIPGALVIWFVRNYIARGFALGRV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSIPGRRIVMACYLIFLMLPIYWLVNMSFKTNGEIVSTMTLWPHQPTLENYRTIFTDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHCEEEECCCC
WYSGYINSLQYVVINTVLSISFALPAAYAFSRYRFLGDKHLFFWLLSNRMAPAAVYALPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
FNLYSAINLFDTPWAVALAHCLFNVPLAVWILEGFVSGVPREIDETAFLDGYSFPRFFVK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
ILMPLIASGIGVAAFFCFMFSWVELLLARTLTSVNAKPISAVMTRTVSAAGMDWGLLAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
GVLTIIPGALVIWFVRNYIARGFALGRV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]