Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751295

Identifier: 86751295

GI number: 86751295

Start: 4760887

End: 4761378

Strand: Reverse

Name: 86751295

Synonym: RPB_4188

Alternate gene names: NA

Gene position: 4761378-4760887 (Counterclockwise)

Preceding gene: 86751300

Following gene: 86751294

Centisome position: 89.3

GC content: 65.24

Gene sequence:

>492_bases
ATGCGCCTTGTTTCGACATCGAAGTTTCCGGCCCTGAGATTGACGGCCCTCCGTTTCCCAGTGGCGGCGGCGCTGGCGCT
GCTCGGCATGCTGGCGCTCGCGCCGGCGGCGCAGGCCGCCAATCCGCTGGAGATGAACTTCTGGCTGTCCGGCCCACGTT
ACGACGGCAATCTGCCGGCCTGCGAGGCGGGGCTGACCTCGGTGACCTATCAGTTCGGCGAGAAGGAAGGCACCTTCTGG
AATTCGGCGCTGCGGATCACCGGCTATACGCAGCTGCGCGAAGTCGCGTTCCGTCCCTGGCAGAGCGACAACATTCCGCG
GCGCTATTGCGCGGCCGAAGCGCATCTGAACGACGGCAAGGTCCGCCCGGTGTATTTCTCGATCATCGAGGACGGCGGTC
TCGCGGGCTTCACCGACGGTGTCGAATTCTGCGTCGTCGGGCTCGATCGCAACTGGGCGTTCAATCCGGCATGCAAGGCG
GCCAAGCCCTGA

Upstream 100 bases:

>100_bases
CATTCGCGCGCCGGGATGTGCGCAGGTGTGGCTGCGCTGCACTTGACCTCCGCATGGCTTCGCGGCACCGTCCGCACCAG
AAAAATCCGGTGGATCGTCC

Downstream 100 bases:

>100_bases
TCCCGCGGGGCGGCGGCGCCCCTGTTTTGGCGCCAGCGCCTTCCACCATTTGCGTTCTTGAAACGTTCCCGATCGCTCGC
TAGGCTTTGCTATTCACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRLVSTSKFPALRLTALRFPVAAALALLGMLALAPAAQAANPLEMNFWLSGPRYDGNLPACEAGLTSVTYQFGEKEGTFW
NSALRITGYTQLREVAFRPWQSDNIPRRYCAAEAHLNDGKVRPVYFSIIEDGGLAGFTDGVEFCVVGLDRNWAFNPACKA
AKP

Sequences:

>Translated_163_residues
MRLVSTSKFPALRLTALRFPVAAALALLGMLALAPAAQAANPLEMNFWLSGPRYDGNLPACEAGLTSVTYQFGEKEGTFW
NSALRITGYTQLREVAFRPWQSDNIPRRYCAAEAHLNDGKVRPVYFSIIEDGGLAGFTDGVEFCVVGLDRNWAFNPACKA
AKP
>Mature_163_residues
MRLVSTSKFPALRLTALRFPVAAALALLGMLALAPAAQAANPLEMNFWLSGPRYDGNLPACEAGLTSVTYQFGEKEGTFW
NSALRITGYTQLREVAFRPWQSDNIPRRYCAAEAHLNDGKVRPVYFSIIEDGGLAGFTDGVEFCVVGLDRNWAFNPACKA
AKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17818; Mature: 17818

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVSTSKFPALRLTALRFPVAAALALLGMLALAPAAQAANPLEMNFWLSGPRYDGNLPA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCCCCC
CEAGLTSVTYQFGEKEGTFWNSALRITGYTQLREVAFRPWQSDNIPRRYCAAEAHLNDGK
CCCCHHHEEEECCCCCCCEECCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC
VRPVYFSIIEDGGLAGFTDGVEFCVVGLDRNWAFNPACKAAKP
CCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLVSTSKFPALRLTALRFPVAAALALLGMLALAPAAQAANPLEMNFWLSGPRYDGNLPA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCCCCCCC
CEAGLTSVTYQFGEKEGTFWNSALRITGYTQLREVAFRPWQSDNIPRRYCAAEAHLNDGK
CCCCHHHEEEECCCCCCCEECCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC
VRPVYFSIIEDGGLAGFTDGVEFCVVGLDRNWAFNPACKAAKP
CCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA