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The map label for this gene is 86751272

Identifier: 86751272

GI number: 86751272

Start: 4736463

End: 4737593

Strand: Direct

Name: 86751272

Synonym: RPB_4165

Alternate gene names: NA

Gene position: 4736463-4737593 (Clockwise)

Preceding gene: 86751271

Following gene: 86751273

Centisome position: 88.84

GC content: 68.7

Gene sequence:

>1131_bases
GTGAACGACGACTCGCCGTTGCTTGCCGAGATCAAGCGGCTGATCGAGACCGCCGGCCCGATGCCGGTGTGGCGCTATAT
GGAGCTCTGCCTCGCCCACCCCGAATACGGCTACTACGTGTCGCGCGATCCGCTCGGCCGCGAGGGCGATTTCACCACCT
CGCCCGAGATCAGCCAGATGTTCGGCGAACTGATCGGGCTGTGGACCGCGTCGGTGTGGAAGGCTGTCGGCGAACCGGGC
GTGCTGCGGCTGATCGAGATCGGTCCCGGCCGCGGCACCATGATCGCCGACGCGCTGCGGGCGCTGCGGGTGCTGCCGCC
GCTGTATCAGTCGCTCAGCGTGCATCTGGTCGAGATCAATCCGGTGCTGCGCGCCAAGCAACAGGCGACGCTGGCCGGCA
TCCGCAACGTGCACTGGCACGAGGATTTCGCCGAGGTGCCGGAAGGCCCGGCGGTGGTGCTCGCCAATGAATATTTCGAC
GTGCTGCCGATCCACCAGGCGGTGAAGCGCGACGGCGGCTGGCACGAGCGCGTGATCGAGATCAGCGCCAGCGGCGACCT
GGTGTTCGGCGTCGCCGACGATCCGATTCCGCGCTTCGAGGTGCTGCTGCCGCCGCTGGTGCAGATGGCCCCGGCCGGCA
CGGTGTTCGAATGGCGTCCGGACAACGAGATCATGGCGATCGCCGCGCGGCTGCGCGACCAAGGCGGGGCGGCGCTGATC
ATCGACTACGGCCATGTCCGCAGCGACGTCGGCGACACCTTCCAGGCGATCGCGCGCCACTCTTTCGCCGACCCACTGCA
GCATCCCGGCGGCGCCGACCTCACCGCCCATGTCGATTTCCAGGCGCTCGGCCGCGCCGCCGAGACGATCGGCGCCCGCA
TCCACGGCCCGGTGACGCAGGGCGAATTCCTCAAGCGGCTGGGGATCGAGACCCGCGCGCTGTCGCTGATGGCCAAAGCG
AGCGCGCAAGTCTCCGAGGACATCGCCGGCGCGCTGAAGCGACTGACCGGCGAAGGCCGCGGCGGGATGGGCGCGATGTT
CAAGGTGATCGGCGTTTCGGATCCGAGCATCACCTCGCTGGTGGCGCTGAGCGACGACGCCGAACGCGCCGCGGAGGGAC
AAAAGGCATGA

Upstream 100 bases:

>100_bases
TGCCGATGGTGATCGCCGGCATCGTCGTGATGTTGGCGGCGCGCCGTCGCGCGAGCACGCCGCCGCAGCCCGCCGGCGCA
AAACCCGGCGAGGCGGTGAA

Downstream 100 bases:

>100_bases
CGATCGCCTCGCAGCGGCTCGCCGCCGTGCCCGGCCTGCGCCACGCCTTCTTCAGCCGCGCCGGCGGCGTGTCGCAGGGC
ATCTATGCCGGCCTCAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNDDSPLLAEIKRLIETAGPMPVWRYMELCLAHPEYGYYVSRDPLGREGDFTTSPEISQMFGELIGLWTASVWKAVGEPG
VLRLIEIGPGRGTMIADALRALRVLPPLYQSLSVHLVEINPVLRAKQQATLAGIRNVHWHEDFAEVPEGPAVVLANEYFD
VLPIHQAVKRDGGWHERVIEISASGDLVFGVADDPIPRFEVLLPPLVQMAPAGTVFEWRPDNEIMAIAARLRDQGGAALI
IDYGHVRSDVGDTFQAIARHSFADPLQHPGGADLTAHVDFQALGRAAETIGARIHGPVTQGEFLKRLGIETRALSLMAKA
SAQVSEDIAGALKRLTGEGRGGMGAMFKVIGVSDPSITSLVALSDDAERAAEGQKA

Sequences:

>Translated_376_residues
MNDDSPLLAEIKRLIETAGPMPVWRYMELCLAHPEYGYYVSRDPLGREGDFTTSPEISQMFGELIGLWTASVWKAVGEPG
VLRLIEIGPGRGTMIADALRALRVLPPLYQSLSVHLVEINPVLRAKQQATLAGIRNVHWHEDFAEVPEGPAVVLANEYFD
VLPIHQAVKRDGGWHERVIEISASGDLVFGVADDPIPRFEVLLPPLVQMAPAGTVFEWRPDNEIMAIAARLRDQGGAALI
IDYGHVRSDVGDTFQAIARHSFADPLQHPGGADLTAHVDFQALGRAAETIGARIHGPVTQGEFLKRLGIETRALSLMAKA
SAQVSEDIAGALKRLTGEGRGGMGAMFKVIGVSDPSITSLVALSDDAERAAEGQKA
>Mature_376_residues
MNDDSPLLAEIKRLIETAGPMPVWRYMELCLAHPEYGYYVSRDPLGREGDFTTSPEISQMFGELIGLWTASVWKAVGEPG
VLRLIEIGPGRGTMIADALRALRVLPPLYQSLSVHLVEINPVLRAKQQATLAGIRNVHWHEDFAEVPEGPAVVLANEYFD
VLPIHQAVKRDGGWHERVIEISASGDLVFGVADDPIPRFEVLLPPLVQMAPAGTVFEWRPDNEIMAIAARLRDQGGAALI
IDYGHVRSDVGDTFQAIARHSFADPLQHPGGADLTAHVDFQALGRAAETIGARIHGPVTQGEFLKRLGIETRALSLMAKA
SAQVSEDIAGALKRLTGEGRGGMGAMFKVIGVSDPSITSLVALSDDAERAAEGQKA

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=347, Percent_Identity=38.0403458213257, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI145701028, Length=324, Percent_Identity=26.5432098765432, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193211224, Length=362, Percent_Identity=33.7016574585635, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24645885, Length=377, Percent_Identity=37.1352785145889, Blast_Score=230, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40667; Mature: 40667

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDSPLLAEIKRLIETAGPMPVWRYMELCLAHPEYGYYVSRDPLGREGDFTTSPEISQM
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHH
FGELIGLWTASVWKAVGEPGVLRLIEIGPGRGTMIADALRALRVLPPLYQSLSVHLVEIN
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEC
PVLRAKQQATLAGIRNVHWHEDFAEVPEGPAVVLANEYFDVLPIHQAVKRDGGWHERVIE
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEE
ISASGDLVFGVADDPIPRFEVLLPPLVQMAPAGTVFEWRPDNEIMAIAARLRDQGGAALI
EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE
IDYGHVRSDVGDTFQAIARHSFADPLQHPGGADLTAHVDFQALGRAAETIGARIHGPVTQ
EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCHHHHHHHHHHHCCHHCCCCCH
GEFLKRLGIETRALSLMAKASAQVSEDIAGALKRLTGEGRGGMGAMFKVIGVSDPSITSL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE
VALSDDAERAAEGQKA
EEECCCHHHHHCCCCC
>Mature Secondary Structure
MNDDSPLLAEIKRLIETAGPMPVWRYMELCLAHPEYGYYVSRDPLGREGDFTTSPEISQM
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHH
FGELIGLWTASVWKAVGEPGVLRLIEIGPGRGTMIADALRALRVLPPLYQSLSVHLVEIN
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEC
PVLRAKQQATLAGIRNVHWHEDFAEVPEGPAVVLANEYFDVLPIHQAVKRDGGWHERVIE
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEE
ISASGDLVFGVADDPIPRFEVLLPPLVQMAPAGTVFEWRPDNEIMAIAARLRDQGGAALI
EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE
IDYGHVRSDVGDTFQAIARHSFADPLQHPGGADLTAHVDFQALGRAAETIGARIHGPVTQ
EECCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCHHHHHHHHHHHCCHHCCCCCH
GEFLKRLGIETRALSLMAKASAQVSEDIAGALKRLTGEGRGGMGAMFKVIGVSDPSITSL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE
VALSDDAERAAEGQKA
EEECCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA