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The map label for this gene is ydeM [H]

Identifier: 86751264

GI number: 86751264

Start: 4730450

End: 4730920

Strand: Reverse

Name: ydeM [H]

Synonym: RPB_4157

Alternate gene names: 86751264

Gene position: 4730920-4730450 (Counterclockwise)

Preceding gene: 86751266

Following gene: 86751263

Centisome position: 88.73

GC content: 67.09

Gene sequence:

>471_bases
ATGACCCTCCTCAGCTTCGAAGATTTCCCCCCCGGCCACTTCGGCCGTTTCGGTCCTCGTCGCGTCACGCGCGAGGAGAT
CGTCGCGTTCGCCGCCGAGTTCGATCCGCAGCCGATGCATCTCGACGAACGCGCCGCCGCGGCGTCGATGCTGCAGGGGC
TGTCCGGTTCGGGCTGGCATCTGTCGTCGCTGATGATGCGCATGATGTACGACGGCTTCATCAAGGACACCGCCTCGCTC
GGCTCGCCCGGCGTCAACGAGATGCGCTGGATGGCGCCGCTGCGCCCCGGCGACGATCTCACGATCGAGGTCGACGTGAT
CGAGGCGCGGGTGTCGAACAGCCGGCCCGAGACCGGCATCGTCACGTTCAAGTGCCACGTCCGCAACGGCAAGGGCCAGA
TGCTGTGCGAGATGGTGTCGCCGATCATCATCCGGCGCCGCGTAGCGGTCGCCGCGACCGAAGCCAGCTAG

Upstream 100 bases:

>100_bases
GTCCCGAAAATTGAACATTACGATCTCCCCAGCAGTCCGGATGGTGACTTGTGATTGCCGCCAATAACGGCCACAATCAG
GCCTCCCGCCAGCAAATGCC

Downstream 100 bases:

>100_bases
CGCGAAGAGTCGAGACCACCCGATGCGTTTTCTCGAAGACCTCCAGGTCGGCCAGCGCCGCGAGATCGGCACCTACGCGT
TCACGGCCGAAAACATCGTC

Product: MaoC-like dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWHLSSLMMRMMYDGFIKDTASL
GSPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGIVTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAATEAS

Sequences:

>Translated_156_residues
MTLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWHLSSLMMRMMYDGFIKDTASL
GSPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGIVTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAATEAS
>Mature_155_residues
TLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWHLSSLMMRMMYDGFIKDTASLG
SPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGIVTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAATEAS

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17269; Mature: 17138

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
LSSLMMRMMYDGFIKDTASLGSPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCE
VTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAATEAS
EEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCC
>Mature Secondary Structure 
TLLSFEDFPPGHFGRFGPRRVTREEIVAFAAEFDPQPMHLDERAAAASMLQGLSGSGWH
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
LSSLMMRMMYDGFIKDTASLGSPGVNEMRWMAPLRPGDDLTIEVDVIEARVSNSRPETGI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCE
VTFKCHVRNGKGQMLCEMVSPIIIRRRVAVAATEAS
EEEEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]