| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751259
Identifier: 86751259
GI number: 86751259
Start: 4727623
End: 4728018
Strand: Direct
Name: 86751259
Synonym: RPB_4152
Alternate gene names: NA
Gene position: 4727623-4728018 (Clockwise)
Preceding gene: 86751256
Following gene: 86751260
Centisome position: 88.67
GC content: 70.45
Gene sequence:
>396_bases ATGGCCGACGCCGATCTGGATGGCATCATCCGGCAGCTTGCGAAGCAGCAGAACAAGACCCTGACGGGCGCGGCGAAAGC GCGGCGCGATCATTATCTCGGGCTCGCCGCCAAGGCCAAGGACGCCGGCGGCAAGGCGCGCGCCAAGTCCCTCGCCAAGG CCGCGATGGAGCAAGGCCTCGCCGCGGCGAAGCGGCTGCAGGTCGCCGCCGACAACGCGGCGGACTCCTACGCGCGCGCG ATGCGGAAGGCGTCCGACACCGCGGCGGCTTCGTCGGCGGCGGAGACCAAGGCGGCCGCGAACAAGGCGGCGAAAGATTC CAGCGCCGCGACCACCGCCCGGCCGAAGCAAGGCAAGGCGCCTGCGAAGAAGAAGGCGGGCAAAACGAAGGCCTGA
Upstream 100 bases:
>100_bases GAAGTCAAGCCCGCTGCGCACGCGCCTCGAATTGCCATTCGCCGCGCGGCCACGCATATTCCGCCGCAACGAATGTTCGT TGATCTGGGGGACGATAGGA
Downstream 100 bases:
>100_bases GTAGTTCGACACGGATGCACGCGCGCGGCCTGCGGCGACGTGCCTGCCGGCCGGCGGCCTGTCCGTAGCAACGGGACGCA ACGCAGACGGCACGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MADADLDGIIRQLAKQQNKTLTGAAKARRDHYLGLAAKAKDAGGKARAKSLAKAAMEQGLAAAKRLQVAADNAADSYARA MRKASDTAAASSAAETKAAANKAAKDSSAATTARPKQGKAPAKKKAGKTKA
Sequences:
>Translated_131_residues MADADLDGIIRQLAKQQNKTLTGAAKARRDHYLGLAAKAKDAGGKARAKSLAKAAMEQGLAAAKRLQVAADNAADSYARA MRKASDTAAASSAAETKAAANKAAKDSSAATTARPKQGKAPAKKKAGKTKA >Mature_130_residues ADADLDGIIRQLAKQQNKTLTGAAKARRDHYLGLAAKAKDAGGKARAKSLAKAAMEQGLAAAKRLQVAADNAADSYARAM RKASDTAAASSAAETKAAANKAAKDSSAATTARPKQGKAPAKKKAGKTKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13277; Mature: 13146
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADLDGIIRQLAKQQNKTLTGAAKARRDHYLGLAAKAKDAGGKARAKSLAKAAMEQGL CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAAKRLQVAADNAADSYARAMRKASDTAAASSAAETKAAANKAAKDSSAATTARPKQGKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PAKKKAGKTKA CCHHCCCCCCC >Mature Secondary Structure ADADLDGIIRQLAKQQNKTLTGAAKARRDHYLGLAAKAKDAGGKARAKSLAKAAMEQGL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AAAKRLQVAADNAADSYARAMRKASDTAAASSAAETKAAANKAAKDSSAATTARPKQGKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PAKKKAGKTKA CCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA