Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751260

Identifier: 86751260

GI number: 86751260

Start: 4728454

End: 4728885

Strand: Direct

Name: 86751260

Synonym: RPB_4153

Alternate gene names: NA

Gene position: 4728454-4728885 (Clockwise)

Preceding gene: 86751259

Following gene: 86751261

Centisome position: 88.69

GC content: 62.96

Gene sequence:

>432_bases
ATGACAGAGCACAGCCTCTGGCGTTTCTCGCGCGCTTTGCATCGCGCGCTCAACGAGCGCCGTCTTGATGACCTGGCGAA
CATCATCGACGAGGACGTCGATTGGGCGATCTATGGCCCGATCGACATGTTCCCGTTCTTCGGCGCGCGCCACGGCAAGG
CCGCGGTGATCGAGGTCTGCCAGCAGATCGCCGACAACATCCGCATCCATCGCTACGATCGCGAGGCGATCATGCTCGGC
GTCGACACCTCCGCGTCGATGGTCCGCTACTCGCTGACCGCGCTCGATACCAACAAGCCGATCAGCCTGCGGATGGCGCA
GTTCGCGCAGTTCAGGGCCGGCAAACTGGTCAGCATGCGGATTCTGATCGACACGTTCGACCTGGTCGAACAGGCGATCG
GCCATCCGATCGACCTGCCGCGGATCGCCTGA

Upstream 100 bases:

>100_bases
ATTCGTTCGTATTAGCACAGCAAAGGGTGCGGCGGCACGCGATGTCGCCTGGTGCTGCTGGCTGAATGTAACTCCAGTTT
CCACGAACCCGGACCGTCTC

Downstream 100 bases:

>100_bases
GCCCCCTCCCCCAACGATCCGGCGTGCGACTGTTAGGACTTGGTTAGCGAATTCGTGGAAACACCGGGTGGCCGCCGCAG
ATTGGCCGCGATGCGGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLG
VDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA

Sequences:

>Translated_143_residues
MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLG
VDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA
>Mature_142_residues
TEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVCQQIADNIRIHRYDREAIMLGV
DTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMRILIDTFDLVEQAIGHPIDLPRIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16368; Mature: 16237

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHH
QQIADNIRIHRYDREAIMLGVDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMR
HHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEHH
ILIDTFDLVEQAIGHPIDLPRIA
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TEHSLWRFSRALHRALNERRLDDLANIIDEDVDWAIYGPIDMFPFFGARHGKAAVIEVC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHH
QQIADNIRIHRYDREAIMLGVDTSASMVRYSLTALDTNKPISLRMAQFAQFRAGKLVSMR
HHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEHH
ILIDTFDLVEQAIGHPIDLPRIA
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA