Click here to switch to the map view.

The map label for this gene is 86751257

Identifier: 86751257

GI number: 86751257

Start: 4725601

End: 4726020

Strand: Reverse

Name: 86751257

Synonym: RPB_4150

Alternate gene names: NA

Gene position: 4726020-4725601 (Counterclockwise)

Preceding gene: 86751258

Following gene: 86751252

Centisome position: 88.64

GC content: 62.86

Gene sequence:

>420_bases
GTGGATGCCCGGCACAAGGCCGGGCATGACGGCAAGAGACGCAAGGAACTCGCGGGTTTCAATGGGGTCGACCATCCAAC
GCGTCGCGATCGTCCCTATATGACGATCATGCCCGCCAAATCTTCCCCCACCATCCTCCGTGCCAAACGTCCGCCGCCGG
TGCTGATCTGCGGCAAATGCCTCTCGCGGATCAAGGACGGCAAGAAGCTGAAGCAGGCGCTGAAATCGGAACTCAAGCAG
CACGCCGCCGTGCACGGCGGCAAGCGCGCCAAGCTCGTCATCACCGGCTGCCTCGGCATCTGTCCAAAGCGCGCGGTGGT
CACGGCGAGTGCTGCGACGCTGGGGCGAGGGGAGTATGTGCTGGTCGAAGAGCGTAAGGAGGTGGAGGAGGCGGTGACAG
CATTGATGAATCAGAGCTGA

Upstream 100 bases:

>100_bases
CGCGCTGCCCTTTTTGCTTGCCCCGAATTGTTTGCCCCGAACTTCGCCACGTCGTCATGGCCGGGCTCGCCCCGGCCATC
CACGTCTTTCCTGCGGCCTC

Downstream 100 bases:

>100_bases
GCTGCGCCGAAAAGTCACAAATTGACGCCGCCCTCAATGTCCTCGTCAGGATCGAACACCATGCCTTCCGTCAGTTCAGT
TATGCGCTTCAACGTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDARHKAGHDGKRRKELAGFNGVDHPTRRDRPYMTIMPAKSSPTILRAKRPPPVLICGKCLSRIKDGKKLKQALKSELKQ
HAAVHGGKRAKLVITGCLGICPKRAVVTASAATLGRGEYVLVEERKEVEEAVTALMNQS

Sequences:

>Translated_139_residues
MDARHKAGHDGKRRKELAGFNGVDHPTRRDRPYMTIMPAKSSPTILRAKRPPPVLICGKCLSRIKDGKKLKQALKSELKQ
HAAVHGGKRAKLVITGCLGICPKRAVVTASAATLGRGEYVLVEERKEVEEAVTALMNQS
>Mature_139_residues
MDARHKAGHDGKRRKELAGFNGVDHPTRRDRPYMTIMPAKSSPTILRAKRPPPVLICGKCLSRIKDGKKLKQALKSELKQ
HAAVHGGKRAKLVITGCLGICPKRAVVTASAATLGRGEYVLVEERKEVEEAVTALMNQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15203; Mature: 15203

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARHKAGHDGKRRKELAGFNGVDHPTRRDRPYMTIMPAKSSPTILRAKRPPPVLICGKC
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEHHHH
LSRIKDGKKLKQALKSELKQHAAVHGGKRAKLVITGCLGICPKRAVVTASAATLGRGEYV
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECHHHCCCCCEE
LVEERKEVEEAVTALMNQS
EEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDARHKAGHDGKRRKELAGFNGVDHPTRRDRPYMTIMPAKSSPTILRAKRPPPVLICGKC
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEHHHH
LSRIKDGKKLKQALKSELKQHAAVHGGKRAKLVITGCLGICPKRAVVTASAATLGRGEYV
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECHHHCCCCCEE
LVEERKEVEEAVTALMNQS
EEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA