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The map label for this gene is 86751245

Identifier: 86751245

GI number: 86751245

Start: 4712206

End: 4713054

Strand: Reverse

Name: 86751245

Synonym: RPB_4138

Alternate gene names: NA

Gene position: 4713054-4712206 (Counterclockwise)

Preceding gene: 86751247

Following gene: 86751244

Centisome position: 88.4

GC content: 68.2

Gene sequence:

>849_bases
ATGTCGATCTCCGGTAAGGTTGATCCCGTCGTGCGGCGCGTGACGTTCGCCGACATCGCGGATGCGTTCGGCCAGGGCCT
GCGCGATTTCCAGGCGGCGCCGCTGATCGGCCTCGCCTTCGGCGCGTTCTACGCCGCCGGCGGCGTGCTGATCCTGCTGT
GTCTCACCGCACTGCACATGGTGTATCTGGCCTATCCGCTCGCCGCCGGCTTCGCGCTGATCGGGCCGTTCGTGGCGCTC
GGCCTGTACGAGGTCAGCCGCCAGCGCGAGGCGGGCAAGCGGCCGTCGCCGATGCAGATCGTCGGGCTGATCCGCAGTCG
CGGCGAGCTCGGCTGGATGGCGTTCGTCACGCTGTTCCTGTTCGTGATCTGGATGTACCAGGTCCGGCTGCTGATCGCGC
TGTTCCTCGGCGTCAGCGCCTCGTTCGGCAGCCTGCAGGAGTTCATCTCGGTGGTGTTGACGACCAATGAGGGGCTGGTG
TTCCTCGCGGTCGGTAATTGCGTCGGCGCGGCGCTGGCGCTGGTGCTGTTCTCGCTCACCGTGGTGTCGTTTCCGCTGCT
GCTCGACCGCGACGTCGATTTCGTCACCGCGATGCTGACCAGCGTCCGCGCCGTGGTGATGAGCCCGGGGCCGATGATCG
CCTGGGCCGCCACCATCGTGCTGCTGCTAGCGATCTCGGCGCTGCCGTATTTCCTCGGCCTGATCGTGACGCTGCCGATC
CTCGGCCACACCACCTGGCACCTGTATCGGAAGATCGTGGCCCCGGTCGCCGCCGAGCTGCCGGAAGCGATGCCCGAGGC
GGCCGCCGACAACGTGATGGCGCTGCCGCGGACCGCGGCGCACGGCTGA

Upstream 100 bases:

>100_bases
TTCCATGCATGATCATCATTGACGGAGGCCGCGACTGCGCGCCTAATCCCTGCAACTAACAACAACGAACATCCCAACCG
TTGACCAGGGAGGAGCGACC

Downstream 100 bases:

>100_bases
CGCCGCCGGTCGCTCGGCGTGTCGCGCGCCGGCGGGATGATGCCCGACCGGCTCGCGCCGCCGCCGCGCGGCTGCTATCA
TTCGCGACCTTTGATCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane-Like Protein; Transmembrane Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSISGKVDPVVRRVTFADIADAFGQGLRDFQAAPLIGLAFGAFYAAGGVLILLCLTALHMVYLAYPLAAGFALIGPFVAL
GLYEVSRQREAGKRPSPMQIVGLIRSRGELGWMAFVTLFLFVIWMYQVRLLIALFLGVSASFGSLQEFISVVLTTNEGLV
FLAVGNCVGAALALVLFSLTVVSFPLLLDRDVDFVTAMLTSVRAVVMSPGPMIAWAATIVLLLAISALPYFLGLIVTLPI
LGHTTWHLYRKIVAPVAAELPEAMPEAAADNVMALPRTAAHG

Sequences:

>Translated_282_residues
MSISGKVDPVVRRVTFADIADAFGQGLRDFQAAPLIGLAFGAFYAAGGVLILLCLTALHMVYLAYPLAAGFALIGPFVAL
GLYEVSRQREAGKRPSPMQIVGLIRSRGELGWMAFVTLFLFVIWMYQVRLLIALFLGVSASFGSLQEFISVVLTTNEGLV
FLAVGNCVGAALALVLFSLTVVSFPLLLDRDVDFVTAMLTSVRAVVMSPGPMIAWAATIVLLLAISALPYFLGLIVTLPI
LGHTTWHLYRKIVAPVAAELPEAMPEAAADNVMALPRTAAHG
>Mature_281_residues
SISGKVDPVVRRVTFADIADAFGQGLRDFQAAPLIGLAFGAFYAAGGVLILLCLTALHMVYLAYPLAAGFALIGPFVALG
LYEVSRQREAGKRPSPMQIVGLIRSRGELGWMAFVTLFLFVIWMYQVRLLIALFLGVSASFGSLQEFISVVLTTNEGLVF
LAVGNCVGAALALVLFSLTVVSFPLLLDRDVDFVTAMLTSVRAVVMSPGPMIAWAATIVLLLAISALPYFLGLIVTLPIL
GHTTWHLYRKIVAPVAAELPEAMPEAAADNVMALPRTAAHG

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30109; Mature: 29978

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC
>Mature Secondary Structure 
SISGKVDPVVRRVTFADIADAFGQGLRDFQAAPLIGLAFGAFYAAGGVLILLCLTALHM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VYLAYPLAAGFALIGPFVALGLYEVSRQREAGKRPSPMQIVGLIRSRGELGWMAFVTLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
FVIWMYQVRLLIALFLGVSASFGSLQEFISVVLTTNEGLVFLAVGNCVGAALALVLFSLT
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH
VVSFPLLLDRDVDFVTAMLTSVRAVVMSPGPMIAWAATIVLLLAISALPYFLGLIVTLPI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHTTWHLYRKIVAPVAAELPEAMPEAAADNVMALPRTAAHG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA