| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yqeY [H]
Identifier: 86751247
GI number: 86751247
Start: 4715035
End: 4715490
Strand: Reverse
Name: yqeY [H]
Synonym: RPB_4140
Alternate gene names: 86751247
Gene position: 4715490-4715035 (Counterclockwise)
Preceding gene: 86751248
Following gene: 86751245
Centisome position: 88.44
GC content: 63.16
Gene sequence:
>456_bases ATGCTGCGCGACGACATCAACAACGCCGTCAAGGACGCGATGCGGGCCAAGGACGAACGCAAGCTCTCGACGTTGCGGAT GATGAATTCGACCATCAAGAACGCCGACATCGAGGCGCGCGGGCAAGGCAAGCCGCCGCTCAGCGACGGTGATCTGCTCG GCGTGTTCCAGAAGATGATCAAGCAGCGTCAGGAATCGGTCGAGCTCTACGACAAGGGCGGCCGCGCCGAACTCGCCGAT CAGGAACGCGCCGAGATCGCGGTGATCCAGGCCTATCTGCCGCAGCAGATGTCCGAGGACGACGTCAAGGCCGCGATCGC CGCGACGATTTCGGAGACTGGCGCCGCCGGCATCAAGGACATGGGCAAGGTGATCGCCGCGCTGAAGGCAAAATATGCCG GCCAGATGGATTTCGGCAAGGCCAGCGGCCTGGTGAAGGCGGCGCTGACCGGTTAA
Upstream 100 bases:
>100_bases CGACGAAGCAATCCAGGGGCGCGGTGCACGCCGCCCCTGGATTGCTTCGCTTCGCTCGCAATGACGTTGAAGTCGAGGAC GACATCTCAAGGAGCCGACC
Downstream 100 bases:
>100_bases TTTCGGACGGACACCAATCCGATCACCCTGTCGCTGTCGCCGTCGTTGCGCCGAACCTTGAGAATCTGTTCTTCTCGATA ATATTGGTAGCAGGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLRDDINNAVKDAMRAKDERKLSTLRMMNSTIKNADIEARGQGKPPLSDGDLLGVFQKMIKQRQESVELYDKGGRAELAD QERAEIAVIQAYLPQQMSEDDVKAAIAATISETGAAGIKDMGKVIAALKAKYAGQMDFGKASGLVKAALTG
Sequences:
>Translated_151_residues MLRDDINNAVKDAMRAKDERKLSTLRMMNSTIKNADIEARGQGKPPLSDGDLLGVFQKMIKQRQESVELYDKGGRAELAD QERAEIAVIQAYLPQQMSEDDVKAAIAATISETGAAGIKDMGKVIAALKAKYAGQMDFGKASGLVKAALTG >Mature_151_residues MLRDDINNAVKDAMRAKDERKLSTLRMMNSTIKNADIEARGQGKPPLSDGDLLGVFQKMIKQRQESVELYDKGGRAELAD QERAEIAVIQAYLPQQMSEDDVKAAIAATISETGAAGIKDMGKVIAALKAKYAGQMDFGKASGLVKAALTG
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16258; Mature: 16258
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDDINNAVKDAMRAKDERKLSTLRMMNSTIKNADIEARGQGKPPLSDGDLLGVFQKMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH KQRQESVELYDKGGRAELADQERAEIAVIQAYLPQQMSEDDVKAAIAATISETGAAGIKD HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH MGKVIAALKAKYAGQMDFGKASGLVKAALTG HHHHHHHHHHHHCCCCCCCHHCCHHHHHCCC >Mature Secondary Structure MLRDDINNAVKDAMRAKDERKLSTLRMMNSTIKNADIEARGQGKPPLSDGDLLGVFQKMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH KQRQESVELYDKGGRAELADQERAEIAVIQAYLPQQMSEDDVKAAIAATISETGAAGIKD HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH MGKVIAALKAKYAGQMDFGKASGLVKAALTG HHHHHHHHHHHHCCCCCCCHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]