| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86751237
Identifier: 86751237
GI number: 86751237
Start: 4703232
End: 4703519
Strand: Reverse
Name: 86751237
Synonym: RPB_4130
Alternate gene names: NA
Gene position: 4703519-4703232 (Counterclockwise)
Preceding gene: 86751238
Following gene: 86751236
Centisome position: 88.22
GC content: 64.93
Gene sequence:
>288_bases ATGGATGCCCGGATCGAGTCCGGGCCTGCCGCCGGCAAGCGAGACGAGGCGATGATGTCGAAACCGGTCATCTTCACCGT GTCTGCGATCTGGGACGCCGACGCGGGCGTGTGGAGCGGGCATTGCGACGAGATTCCGGCCGCGGCCGATGCACCGACGC TCGACGAATTGCTCGCCAAGATGGAAGCCATGACGCTGGATCTGTTGCCGGATAATCATCCCGGCGTCGATCCGGCGGCG GTGTTCTTGCAGATCACCGCCTTGCGCGAAGCGCTATCGGCGGCCTGA
Upstream 100 bases:
>100_bases CCGAGCCGGTCAAGGAAGCTGCGGAGCTTCTTGGACAACTGAGACGATCAACCAGCGTCGTCATTGCCGGGCTTGACCCG GCAATCCATCACTCTTCAGG
Downstream 100 bases:
>100_bases TGGCGCCGCAGTTCGACCGCGAACTGAGAGAGCTGCTGCGCGCCGCCGGCTGCGCGATGGTCCGGCAAGGCAAGGGAAGC CACGAGATCTGGCACAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MDARIESGPAAGKRDEAMMSKPVIFTVSAIWDADAGVWSGHCDEIPAAADAPTLDELLAKMEAMTLDLLPDNHPGVDPAA VFLQITALREALSAA
Sequences:
>Translated_95_residues MDARIESGPAAGKRDEAMMSKPVIFTVSAIWDADAGVWSGHCDEIPAAADAPTLDELLAKMEAMTLDLLPDNHPGVDPAA VFLQITALREALSAA >Mature_95_residues MDARIESGPAAGKRDEAMMSKPVIFTVSAIWDADAGVWSGHCDEIPAAADAPTLDELLAKMEAMTLDLLPDNHPGVDPAA VFLQITALREALSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9974; Mature: 9974
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARIESGPAAGKRDEAMMSKPVIFTVSAIWDADAGVWSGHCDEIPAAADAPTLDELLAK CCCCCCCCCCCCCCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH MEAMTLDLLPDNHPGVDPAAVFLQITALREALSAA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDARIESGPAAGKRDEAMMSKPVIFTVSAIWDADAGVWSGHCDEIPAAADAPTLDELLAK CCCCCCCCCCCCCCCHHHHCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH MEAMTLDLLPDNHPGVDPAAVFLQITALREALSAA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA