Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751236

Identifier: 86751236

GI number: 86751236

Start: 4703035

End: 4703232

Strand: Reverse

Name: 86751236

Synonym: RPB_4129

Alternate gene names: NA

Gene position: 4703232-4703035 (Counterclockwise)

Preceding gene: 86751237

Following gene: 86751235

Centisome position: 88.21

GC content: 67.68

Gene sequence:

>198_bases
ATGGCGCCGCAGTTCGACCGCGAACTGAGAGAGCTGCTGCGCGCCGCCGGCTGCGCGATGGTCCGGCAAGGCAAGGGAAG
CCACGAGATCTGGCACAGCCCCATCACCGGTCGCAATTTCGCCGTGCCGATCGGCATCCCGAGCCGTCACACCGCGAATG
CCATCCTGCGCCAGGCCGGGCTGCCCAAGGCGTTTTGA

Upstream 100 bases:

>100_bases
CCATGACGCTGGATCTGTTGCCGGATAATCATCCCGGCGTCGATCCGGCGGCGGTGTTCTTGCAGATCACCGCCTTGCGC
GAAGCGCTATCGGCGGCCTG

Downstream 100 bases:

>100_bases
GCGGCGGCTTCGAGTCGAAGCTTTCGAGCCCTGGTGCCCGGATGAGCGAAGCGACATCCGGGATCACGCCGCCGCCTATC
GCTGCGCTCATGCGGGCTAC

Product: YcfA-like

Products: NA

Alternate protein names: YcfA-Like; YcfA-Like Protein

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAPQFDRELRELLRAAGCAMVRQGKGSHEIWHSPITGRNFAVPIGIPSRHTANAILRQAGLPKAF

Sequences:

>Translated_65_residues
MAPQFDRELRELLRAAGCAMVRQGKGSHEIWHSPITGRNFAVPIGIPSRHTANAILRQAGLPKAF
>Mature_64_residues
APQFDRELRELLRAAGCAMVRQGKGSHEIWHSPITGRNFAVPIGIPSRHTANAILRQAGLPKAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7148; Mature: 7017

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPQFDRELRELLRAAGCAMVRQGKGSHEIWHSPITGRNFAVPIGIPSRHTANAILRQAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCC
LPKAF
CCCCC
>Mature Secondary Structure 
APQFDRELRELLRAAGCAMVRQGKGSHEIWHSPITGRNFAVPIGIPSRHTANAILRQAG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCC
LPKAF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA