Click here to switch to the map view.

The map label for this gene is 86751229

Identifier: 86751229

GI number: 86751229

Start: 4693772

End: 4694137

Strand: Reverse

Name: 86751229

Synonym: RPB_4122

Alternate gene names: NA

Gene position: 4694137-4693772 (Counterclockwise)

Preceding gene: 86751231

Following gene: 86751228

Centisome position: 88.04

GC content: 70.22

Gene sequence:

>366_bases
ATGCAAACCGGCCATCTGCTCACACCGCTGCCGCCCGCCGGTCCGGACGAAGCGCTCGATACCCTGCTCGCACGCGGCGG
CGTCCGCATCGAGCGCATCGTCTCGTTCGGCCAGGCGAGCCCCGAGGGCTTCTGGTACGACCAGGCCGAGGACGAATTCG
TCGTGCTGCTGTCCGGCGCCGCGACGCTGCGCTTCGACGACGGCCGCGAGGTGCAACTCACGCCGGGCGTCTGGGTCGAC
ATTCCCGCCCATTGCCGCCACCGCGTCGAAGCGACCGCGGCGGGCGAGCCGACAGTGTGGCTGGCGGTGTTCTGGCCGGC
GGAAGCGGGCGAGGCAGAAGCGGATCAAACCGACAGGACGACATGA

Upstream 100 bases:

>100_bases
GATTGCCTGCCAAACAGGCGCTAAAATGCGCTGCACTGCGGGGGCAGGCGCAGGCCGCCCGCCCCGGCCACGTGTCGCCG
CCAGCTTCAGGATATTGCCC

Downstream 100 bases:

>100_bases
GAGCTGTCGCGTCGTTCGGCTCACGCCGCGCCTCTTGACAACATTCCTATTAAGATTATAGTCCGCATCGTCCTGTCCGT
GAGGGGCGCTTCGCGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQTGHLLTPLPPAGPDEALDTLLARGGVRIERIVSFGQASPEGFWYDQAEDEFVVLLSGAATLRFDDGREVQLTPGVWVD
IPAHCRHRVEATAAGEPTVWLAVFWPAEAGEAEADQTDRTT

Sequences:

>Translated_121_residues
MQTGHLLTPLPPAGPDEALDTLLARGGVRIERIVSFGQASPEGFWYDQAEDEFVVLLSGAATLRFDDGREVQLTPGVWVD
IPAHCRHRVEATAAGEPTVWLAVFWPAEAGEAEADQTDRTT
>Mature_121_residues
MQTGHLLTPLPPAGPDEALDTLLARGGVRIERIVSFGQASPEGFWYDQAEDEFVVLLSGAATLRFDDGREVQLTPGVWVD
IPAHCRHRVEATAAGEPTVWLAVFWPAEAGEAEADQTDRTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13141; Mature: 13141

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGHLLTPLPPAGPDEALDTLLARGGVRIERIVSFGQASPEGFWYDQAEDEFVVLLSGA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEEECC
ATLRFDDGREVQLTPGVWVDIPAHCRHRVEATAAGEPTVWLAVFWPAEAGEAEADQTDRT
EEEEECCCCEEEECCCEEEECCHHHCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCC
T
C
>Mature Secondary Structure
MQTGHLLTPLPPAGPDEALDTLLARGGVRIERIVSFGQASPEGFWYDQAEDEFVVLLSGA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEEECC
ATLRFDDGREVQLTPGVWVDIPAHCRHRVEATAAGEPTVWLAVFWPAEAGEAEADQTDRT
EEEEECCCCEEEECCCEEEECCHHHCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA