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The map label for this gene is 86751224

Identifier: 86751224

GI number: 86751224

Start: 4688592

End: 4690169

Strand: Direct

Name: 86751224

Synonym: RPB_4117

Alternate gene names: NA

Gene position: 4688592-4690169 (Clockwise)

Preceding gene: 86751214

Following gene: 86751225

Centisome position: 87.94

GC content: 71.67

Gene sequence:

>1578_bases
GTGTTGAATGCCCCCTCGGAAATCGTCTCGACCGCGCAGGCCTCGGCCCAGCGCGCGACCACGCGCCAGGACCGAACGTC
CCCGACCGACAGCTTCTCCTCGCTGGTCGACAGCAATATCGCGGCGAACACCGCCAGCAGCCAACCGGCGCCGACGCTCG
ATACCCGTGCGTCCGGCAGTTCGAGCGACGACCGCAGCGCCGGCACCCGTCGAAACGACACCACCGACCAGAGCCGGACC
AACGATCGCAACGACGACAGCCGGCGGGCGTCGGATTCCGGCAGCAGCAACACTCCTTCGGCGCGCGACGACGCGGCGCG
AGGCGATGCGGCTGCGACCTCGACATCGACCACCAAGACCAAGACCGACGGGAGCAAAGACGCCAAAGCGGCCGGTGACG
GCAAGGACGGCGACGGCAAGGACGGCGCCGACGCGGCCGCTTCCCCGGATCAGAGCCCGATGGTTGCCACGACCGCAACG
ACGCCCCAGCTGATCGCGGCGCCTGTCGCCGTGGCGACCGCCACGGTCGACACCGCGACCGATGCGGCTGCAGCAGTGAC
CGGAACGACCGCCGATGCCGCCACAACCGTCGCCGGCGGACCGCTCGCGCTCGTCGCCGCCGCGGCGCAGAAGGCCAAGG
CCGCGGTCGACGATCTCGCCGCGACCGGTCAGCCGACCGAAACCGCGGCTCCCGACGCCGCGGCCGAGACCGCGACCGCG
ACCGCCGCTGGGACGGCCGTGCTCGATCCGAAGCTCGCGGCGCTGGCGGCGCAGCCCAATGCCGCCAAGGCCGGCACCAA
GCCCGCGGCCCAGTCCGACGATTCCGCCGCCACGGCCAAGACCAACGCCGTCACCGCTGCGACCGACGCCTCGACGCCTG
GCCAGGCCCAGACCGGAACGGCGCAACCGCAGGCGACATCCGGCGATGCGGCGAAGACCCCCGAGACGACCGCCGCCGCC
GTCGACCAGACGAACGCGCAACCGAAGGCGGCCGTGCATCACCACGCCGATGCGCCGACGCCGTCGCTGACCGACGCCGC
TTCACAGCCGCAAACGCAGGTGCCGACCGCGCAGCCGCTGCAGGCCTCCACCGTGACCCAGCAGACGGCCGCGTCGTCGC
AGCTCACCGCCGCGCTCGCGACCAATGCGCCGGTGGCGATGCAGGACCTCGCCGTCACCATCGCCGCACGGGCGACCAGT
GGCGCCAGCCGGTTCGATATCCGGCTCGATCCCGCCGAACTCGGCCGCATCGACGTCCGCATCGAGGTCGACCGCAGCGG
CAACGTGACCTCGCATCTCACCGTCGAGAAGCCCGAGACGCTGGCGATGCTGCGGCAGGATCAGAACCAGCTGCAGCGCG
CGCTCGACAATGCCGGGCTGAGAACCGGCGACAGCGGCCTGCAATTCAGCCTGCGCGATCAATCCTCGTCGGGTCAGCAG
CAGGGCCAACAGCAGGACAACGGCCGGCACGCGCAGCGGCTGGTGATCAGCGAGGAAGAGCTGCCGACCGCGGTCGCCGC
CGGTCGCAGCTACGGCCGGATGCTCGGTGCGAGCAGCGGCGTCGATATCCGGATCTGA

Upstream 100 bases:

>100_bases
CCGTAGAATCTATATCGTTGCGATGTCTGAATAATTTCAGCTTTTCGGGGGTGGCCCGGTCCTTGCTCAGAAGGGCGTGG
ATCAGTGTGAGAACGCGCCC

Downstream 100 bases:

>100_bases
GGAGTCATCACCATGTCAGCCGCAGCCACCACCGCGACGACGCCGTATTCGGCTCCCAACGCCAACTACACCGCGACCGC
GACGTCGAGCTCGACCACCG

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: Flagellar Hook Length Determination Protein; Flagellar Hook-Length Control Protein FliK; Flagellar Hook Length Determination-Like Protein

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MLNAPSEIVSTAQASAQRATTRQDRTSPTDSFSSLVDSNIAANTASSQPAPTLDTRASGSSSDDRSAGTRRNDTTDQSRT
NDRNDDSRRASDSGSSNTPSARDDAARGDAAATSTSTTKTKTDGSKDAKAAGDGKDGDGKDGADAAASPDQSPMVATTAT
TPQLIAAPVAVATATVDTATDAAAAVTGTTADAATTVAGGPLALVAAAAQKAKAAVDDLAATGQPTETAAPDAAAETATA
TAAGTAVLDPKLAALAAQPNAAKAGTKPAAQSDDSAATAKTNAVTAATDASTPGQAQTGTAQPQATSGDAAKTPETTAAA
VDQTNAQPKAAVHHHADAPTPSLTDAASQPQTQVPTAQPLQASTVTQQTAASSQLTAALATNAPVAMQDLAVTIAARATS
GASRFDIRLDPAELGRIDVRIEVDRSGNVTSHLTVEKPETLAMLRQDQNQLQRALDNAGLRTGDSGLQFSLRDQSSSGQQ
QGQQQDNGRHAQRLVISEEELPTAVAAGRSYGRMLGASSGVDIRI

Sequences:

>Translated_525_residues
MLNAPSEIVSTAQASAQRATTRQDRTSPTDSFSSLVDSNIAANTASSQPAPTLDTRASGSSSDDRSAGTRRNDTTDQSRT
NDRNDDSRRASDSGSSNTPSARDDAARGDAAATSTSTTKTKTDGSKDAKAAGDGKDGDGKDGADAAASPDQSPMVATTAT
TPQLIAAPVAVATATVDTATDAAAAVTGTTADAATTVAGGPLALVAAAAQKAKAAVDDLAATGQPTETAAPDAAAETATA
TAAGTAVLDPKLAALAAQPNAAKAGTKPAAQSDDSAATAKTNAVTAATDASTPGQAQTGTAQPQATSGDAAKTPETTAAA
VDQTNAQPKAAVHHHADAPTPSLTDAASQPQTQVPTAQPLQASTVTQQTAASSQLTAALATNAPVAMQDLAVTIAARATS
GASRFDIRLDPAELGRIDVRIEVDRSGNVTSHLTVEKPETLAMLRQDQNQLQRALDNAGLRTGDSGLQFSLRDQSSSGQQ
QGQQQDNGRHAQRLVISEEELPTAVAAGRSYGRMLGASSGVDIRI
>Mature_525_residues
MLNAPSEIVSTAQASAQRATTRQDRTSPTDSFSSLVDSNIAANTASSQPAPTLDTRASGSSSDDRSAGTRRNDTTDQSRT
NDRNDDSRRASDSGSSNTPSARDDAARGDAAATSTSTTKTKTDGSKDAKAAGDGKDGDGKDGADAAASPDQSPMVATTAT
TPQLIAAPVAVATATVDTATDAAAAVTGTTADAATTVAGGPLALVAAAAQKAKAAVDDLAATGQPTETAAPDAAAETATA
TAAGTAVLDPKLAALAAQPNAAKAGTKPAAQSDDSAATAKTNAVTAATDASTPGQAQTGTAQPQATSGDAAKTPETTAAA
VDQTNAQPKAAVHHHADAPTPSLTDAASQPQTQVPTAQPLQASTVTQQTAASSQLTAALATNAPVAMQDLAVTIAARATS
GASRFDIRLDPAELGRIDVRIEVDRSGNVTSHLTVEKPETLAMLRQDQNQLQRALDNAGLRTGDSGLQFSLRDQSSSGQQ
QGQQQDNGRHAQRLVISEEELPTAVAAGRSYGRMLGASSGVDIRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52553; Mature: 52553

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNAPSEIVSTAQASAQRATTRQDRTSPTDSFSSLVDSNIAANTASSQPAPTLDTRASGS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
SSDDRSAGTRRNDTTDQSRTNDRNDDSRRASDSGSSNTPSARDDAARGDAAATSTSTTKT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
KTDGSKDAKAAGDGKDGDGKDGADAAASPDQSPMVATTATTPQLIAAPVAVATATVDTAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHEEHHCCC
DAAAAVTGTTADAATTVAGGPLALVAAAAQKAKAAVDDLAATGQPTETAAPDAAAETATA
CHHHHEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
TAAGTAVLDPKLAALAAQPNAAKAGTKPAAQSDDSAATAKTNAVTAATDASTPGQAQTGT
HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCC
AQPQATSGDAAKTPETTAAAVDQTNAQPKAAVHHHADAPTPSLTDAASQPQTQVPTAQPL
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC
QASTVTQQTAASSQLTAALATNAPVAMQDLAVTIAARATSGASRFDIRLDPAELGRIDVR
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCEEEEEECHHHCCEEEEE
IEVDRSGNVTSHLTVEKPETLAMLRQDQNQLQRALDNAGLRTGDSGLQFSLRDQSSSGQQ
EEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHH
QGQQQDNGRHAQRLVISEEELPTAVAAGRSYGRMLGASSGVDIRI
HHHHHHCCHHHHEEEECHHHCCHHHHHCCHHHHHHCCCCCCEEEC
>Mature Secondary Structure
MLNAPSEIVSTAQASAQRATTRQDRTSPTDSFSSLVDSNIAANTASSQPAPTLDTRASGS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
SSDDRSAGTRRNDTTDQSRTNDRNDDSRRASDSGSSNTPSARDDAARGDAAATSTSTTKT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
KTDGSKDAKAAGDGKDGDGKDGADAAASPDQSPMVATTATTPQLIAAPVAVATATVDTAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHEEHHCCC
DAAAAVTGTTADAATTVAGGPLALVAAAAQKAKAAVDDLAATGQPTETAAPDAAAETATA
CHHHHEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
TAAGTAVLDPKLAALAAQPNAAKAGTKPAAQSDDSAATAKTNAVTAATDASTPGQAQTGT
HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCC
AQPQATSGDAAKTPETTAAAVDQTNAQPKAAVHHHADAPTPSLTDAASQPQTQVPTAQPL
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC
QASTVTQQTAASSQLTAALATNAPVAMQDLAVTIAARATSGASRFDIRLDPAELGRIDVR
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCEEEEEECHHHCCEEEEE
IEVDRSGNVTSHLTVEKPETLAMLRQDQNQLQRALDNAGLRTGDSGLQFSLRDQSSSGQQ
EEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHH
QGQQQDNGRHAQRLVISEEELPTAVAAGRSYGRMLGASSGVDIRI
HHHHHHCCHHHHEEEECHHHCCHHHHHCCHHHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA