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The map label for this gene is yngJ [H]

Identifier: 86751210

GI number: 86751210

Start: 4671185

End: 4672432

Strand: Direct

Name: yngJ [H]

Synonym: RPB_4102

Alternate gene names: 86751210

Gene position: 4671185-4672432 (Clockwise)

Preceding gene: 86751208

Following gene: 86751212

Centisome position: 87.61

GC content: 63.78

Gene sequence:

>1248_bases
ATGTTGCGCATGTGCCACGCTCGATACGGTCGATCGTTTCGAACCGGCTGGAGATCGCACGTGGATTTTGAACTGTCCAA
GGACCAACAGGAGATCAAGGCGCGGGCGGCGGCCTTTGTCGACGAGGTGTGCCGACCACTCGAGGATCAATGGGGCATCG
ACGACTACGCCGTTCCGCACGACGTCTTCATGGACGTCGTGCGCCGGTTTCGCGAGTATGGTTTCCGGGGTCTCGCCGTG
CCGAAGGACGCCGGCGGTCAGGGGCTCGGCACCATGGCGAAGTGCCTCGTCTACGAAGAGATCGTCAAATCGCCGGTGAT
GCACGGCCTGCTGACGACCTGGTCGGGGTTCCTCGATCCGCACCCGGCGCTGTACGTTGCCCCGGAATGGCAGAAGGAGG
CTTATCTCTACCCGATCCTGAAAGAGGACAAGTTCTACCACATCAATATTTCCGAACCCGGCGCCGGCTCGGACGCCGCC
GGAATCGAGACAACCGCGGTGCGCGACGGCGACACCTATGTGATCAACGGCATCAAGCGCTGGGCGCCGCCGCCGAACCA
TCCGGGCATCACGCCGAAATATCTGCTCTGTTACGCAGTCACCGATCCGGGCAAAGGCTACGAAGGCATCAGCCTGTTTC
TGGTGGACTATCCCAATCCCGGCGTCTCGGTCTTGCGCGAATACACCACGATGGCGCCCGGAACCTATCTCGGGCGGAGC
TGCGACTATCAGTACAAGGACTGCGTCGTTCCGGCGAAGAACTTGCTCGGCGCCGAGGGCATGGGCTTCCGCTACATGAT
GGATCAGCTCAACCGCAACCGCACCGTGATCGGTGCCCGGCTCACCGGCACCGCGCGTTGGGCGCAGACCCAGGCGGTCA
AGCGCGCACGCGCGCGCGAGACCTTCGGCAAGCCGCTGTCCGAACGGCAGGCGATCCAGTGGATGCTCGCCGAGTCCGAG
ATGGACCTCGAGCAGTCGCGGCTGATGGTCTACAAGACCGCCTGGATGCTGGATCAGGGGCTCGACGCACGCAAGGAAGC
CGCGATGGTGAAGTGCTTCGCGCCCCTCGCCGCCTGCCGGGTGATCGATCGCGCGATTCAGATCCACGGCGGGCTCGGCG
TGCTGCAGGAGAGCCGGTTCGGCCAGCTCTATTTCCAGAGTCGCATCGCGCAGGTCGCCGAGGGCACCACCGAGGTGATG
AAGATGACCATCGCCCGTGAGGTGCTGCGCGCCAGCATGACGGACTAG

Upstream 100 bases:

>100_bases
CCGGCAGCCGCCCGATCTGTCGGCGGAGTAACAAGAGGCCGGAGAGAAGGCTGGTGCAGGTCTCTGGCCTAATCGGCCAA
CACAATTGAGGTGCGGCGTC

Downstream 100 bases:

>100_bases
TCGACGCATCTTCCGCCAGCAAGGAACGCCCGGCTTTCGCCGGGCGTTTTCATTTGTCGCCGATCTATTTTGCGGCGTCG
ATCACCACGCCGATCGGCTT

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLEDQWGIDDYAVPHDVFMDVVRRFREYGFRGLAV
PKDAGGQGLGTMAKCLVYEEIVKSPVMHGLLTTWSGFLDPHPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAA
GIETTAVRDGDTYVINGIKRWAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVSVLREYTTMAPGTYLGRS
CDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTGTARWAQTQAVKRARARETFGKPLSERQAIQWMLAESE
MDLEQSRLMVYKTAWMLDQGLDARKEAAMVKCFAPLAACRVIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTEVM
KMTIAREVLRASMTD

Sequences:

>Translated_415_residues
MLRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLEDQWGIDDYAVPHDVFMDVVRRFREYGFRGLAV
PKDAGGQGLGTMAKCLVYEEIVKSPVMHGLLTTWSGFLDPHPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAA
GIETTAVRDGDTYVINGIKRWAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVSVLREYTTMAPGTYLGRS
CDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTGTARWAQTQAVKRARARETFGKPLSERQAIQWMLAESE
MDLEQSRLMVYKTAWMLDQGLDARKEAAMVKCFAPLAACRVIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTEVM
KMTIAREVLRASMTD
>Mature_415_residues
MLRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLEDQWGIDDYAVPHDVFMDVVRRFREYGFRGLAV
PKDAGGQGLGTMAKCLVYEEIVKSPVMHGLLTTWSGFLDPHPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAA
GIETTAVRDGDTYVINGIKRWAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVSVLREYTTMAPGTYLGRS
CDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTGTARWAQTQAVKRARARETFGKPLSERQAIQWMLAESE
MDLEQSRLMVYKTAWMLDQGLDARKEAAMVKCFAPLAACRVIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTEVM
KMTIAREVLRASMTD

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=349, Percent_Identity=33.810888252149, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI4557231, Length=389, Percent_Identity=33.1619537275064, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI187960098, Length=392, Percent_Identity=33.4183673469388, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI4501859, Length=384, Percent_Identity=28.90625, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI7656849, Length=393, Percent_Identity=28.498727735369, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI226958412, Length=384, Percent_Identity=27.0833333333333, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI226958414, Length=341, Percent_Identity=28.4457478005865, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI21361497, Length=397, Percent_Identity=28.9672544080605, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI38505218, Length=403, Percent_Identity=27.7915632754342, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI76496475, Length=349, Percent_Identity=31.2320916905444, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI4557235, Length=349, Percent_Identity=31.2320916905444, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI211971008, Length=289, Percent_Identity=31.8339100346021, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI48976061, Length=289, Percent_Identity=31.8339100346021, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=26.9333333333333, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI87081958, Length=400, Percent_Identity=29.5, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1786223, Length=348, Percent_Identity=25.8620689655172, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082384, Length=269, Percent_Identity=25.6505576208178, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17508101, Length=405, Percent_Identity=31.358024691358, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17569725, Length=406, Percent_Identity=29.8029556650246, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17534899, Length=398, Percent_Identity=30.4020100502513, Blast_Score=174, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17506239, Length=368, Percent_Identity=30.1630434782609, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17570075, Length=423, Percent_Identity=27.6595744680851, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI71990804, Length=295, Percent_Identity=33.2203389830508, Blast_Score=150, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17533517, Length=391, Percent_Identity=29.4117647058824, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17538396, Length=386, Percent_Identity=26.1658031088083, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI71985184, Length=370, Percent_Identity=28.6486486486486, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=30.9322033898305, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17562446, Length=288, Percent_Identity=28.8194444444444, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17551932, Length=372, Percent_Identity=27.9569892473118, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=370, Percent_Identity=26.4864864864865, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=283, Percent_Identity=26.1484098939929, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=317, Percent_Identity=27.4447949526814, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21356377, Length=344, Percent_Identity=31.9767441860465, Blast_Score=191, Evalue=9e-49,
Organism=Drosophila melanogaster, GI24646207, Length=348, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24660351, Length=406, Percent_Identity=30.5418719211823, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24666513, Length=388, Percent_Identity=29.8969072164948, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI21355753, Length=399, Percent_Identity=29.3233082706767, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=30.4597701149425, Blast_Score=129, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46727; Mature: 46727

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLEDQWGIDDYAVPH
CCCCHHHHHCCHHHCCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DVFMDVVRRFREYGFRGLAVPKDAGGQGLGTMAKCLVYEEIVKSPVMHGLLTTWSGFLDP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAAGIETTAVRDGDTYVINGIKR
CCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCHHH
WAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVSVLREYTTMAPGTYLGRS
CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
CDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTGTARWAQTQAVKRARARE
CCCCHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
TFGKPLSERQAIQWMLAESEMDLEQSRLMVYKTAWMLDQGLDARKEAAMVKCFAPLAACR
HHCCCHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTEVMKMTIAREVLRASMTD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRMCHARYGRSFRTGWRSHVDFELSKDQQEIKARAAAFVDEVCRPLEDQWGIDDYAVPH
CCCCHHHHHCCHHHCCCHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DVFMDVVRRFREYGFRGLAVPKDAGGQGLGTMAKCLVYEEIVKSPVMHGLLTTWSGFLDP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPALYVAPEWQKEAYLYPILKEDKFYHINISEPGAGSDAAGIETTAVRDGDTYVINGIKR
CCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCHHH
WAPPPNHPGITPKYLLCYAVTDPGKGYEGISLFLVDYPNPGVSVLREYTTMAPGTYLGRS
CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
CDYQYKDCVVPAKNLLGAEGMGFRYMMDQLNRNRTVIGARLTGTARWAQTQAVKRARARE
CCCCHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
TFGKPLSERQAIQWMLAESEMDLEQSRLMVYKTAWMLDQGLDARKEAAMVKCFAPLAACR
HHCCCHHHHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VIDRAIQIHGGLGVLQESRFGQLYFQSRIAQVAEGTTEVMKMTIAREVLRASMTD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]