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The map label for this gene is dppC [H]

Identifier: 86751159

GI number: 86751159

Start: 4621428

End: 4622348

Strand: Direct

Name: dppC [H]

Synonym: RPB_4051

Alternate gene names: 86751159

Gene position: 4621428-4622348 (Clockwise)

Preceding gene: 86751158

Following gene: 86751160

Centisome position: 86.68

GC content: 67.1

Gene sequence:

>921_bases
ATGAGCAGCGTCGCGCCCCCGATCACCGAGCCCGCCAAGCCCTCAACGGCCGCAAAGCCCGTGCGGCGCTCCGGCCTGGT
CGAAATGATCGCGCACACCCGCTACGTCCTCGGCGACAACCGCGTCACCGCCTTCGCCTTCGGGCTGCTGGTGGTGATCG
TTTTCGCCGCATTGTTCGGCCCGTATATCGTTCCCTACGACCCGCTCGCCAGCAATACCGCGCAGGCGCTGAAGCCGCCG
TCCGCCGCCAACTGGTTCGGCACCGACCAGCTCGGCCGCGATATCTTCAGCCGCGTCGTCGTCGCCACCCGGCTCGATCT
GTTCATCGCCGTCGCCTCGGTGGTGCTGGTGTTCCTGATGGGCGGCCTCGCCGGCATCGCAGCCGGTTATTTCGGCGGAT
GGACCGACCGCATCGTCGGCCGCATCGCCGACACCATCATGGCGTTTCCGCTGTTCGTGCTGGCGATGGGCATCGTCGCG
GCGCTCGGCAACACCGTGCAGAACATCATCATCGCCACCGCGATCGTCAACTTCCCGCTTTACGCCCGGGTCGCCCGCGC
CGAGGCCAATGTCCGGCGCGAGGCCGGCTTCGTCATGGCAGCAAGGCTTTCGGGCAACAGCGAGATGCGCATCCTGCTGG
TGCACATCCTGCCGAACATCATGCCGATCATGATCGTGCAGATGTCGCTGACGATGGGCTACGCCATCCTCAACGCCGCC
GGGCTGTCGTTCATCGGCCTCGGCGTCCGCCCGCCCACCGCCGAATGGGGCATCATGGTCGCCGAGGGCGCCTCGTTCAT
GGTCTCGGGCGAGTGGTGGATCGCGCTGTTCCCCGGCCTCGCGCTGATGACCGCCGTGTTCTGCTTCAACCTGCTCGGCG
ACGGCCTGCGCGACATCTTCGACCCGCAGCGGAGGACGTGA

Upstream 100 bases:

>100_bases
TCGTGCTCACCATGGCGATCATGTATGTGCTGCTGAACCTGGTGATCGACATCCTCTACGGCGTCATCGATCCGCGCGTG
CGGCTGGAAGGATAGTGGAC

Downstream 100 bases:

>100_bases
GGATGGTCTTGTTAGCTGCTTCCCTCGCCCCACACGCCTCCGTCATGGCCGGGCTTGCCCCGGCCATCCATCCCGCTTCG
CAAAGGCGCCTTTCGAAGGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSSVAPPITEPAKPSTAAKPVRRSGLVEMIAHTRYVLGDNRVTAFAFGLLVVIVFAALFGPYIVPYDPLASNTAQALKPP
SAANWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLMGGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVLAMGIVA
ALGNTVQNIIIATAIVNFPLYARVARAEANVRREAGFVMAARLSGNSEMRILLVHILPNIMPIMIVQMSLTMGYAILNAA
GLSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWIALFPGLALMTAVFCFNLLGDGLRDIFDPQRRT

Sequences:

>Translated_306_residues
MSSVAPPITEPAKPSTAAKPVRRSGLVEMIAHTRYVLGDNRVTAFAFGLLVVIVFAALFGPYIVPYDPLASNTAQALKPP
SAANWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLMGGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVLAMGIVA
ALGNTVQNIIIATAIVNFPLYARVARAEANVRREAGFVMAARLSGNSEMRILLVHILPNIMPIMIVQMSLTMGYAILNAA
GLSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWIALFPGLALMTAVFCFNLLGDGLRDIFDPQRRT
>Mature_305_residues
SSVAPPITEPAKPSTAAKPVRRSGLVEMIAHTRYVLGDNRVTAFAFGLLVVIVFAALFGPYIVPYDPLASNTAQALKPPS
AANWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLMGGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVLAMGIVAA
LGNTVQNIIIATAIVNFPLYARVARAEANVRREAGFVMAARLSGNSEMRILLVHILPNIMPIMIVQMSLTMGYAILNAAG
LSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWIALFPGLALMTAVFCFNLLGDGLRDIFDPQRRT

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=292, Percent_Identity=39.3835616438356, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1787054, Length=263, Percent_Identity=43.7262357414449, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=41.1522633744856, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789964, Length=259, Percent_Identity=40.5405405405405, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787498, Length=268, Percent_Identity=31.7164179104478, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1787549, Length=260, Percent_Identity=31.5384615384615, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=26.431718061674, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32762; Mature: 32631

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVAPPITEPAKPSTAAKPVRRSGLVEMIAHTRYVLGDNRVTAFAFGLLVVIVFAALFG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
PYIVPYDPLASNTAQALKPPSAANWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLM
CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVLAMGIVAALGNTVQNIIIATAIVNFPL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YARVARAEANVRREAGFVMAARLSGNSEMRILLVHILPNIMPIMIVQMSLTMGYAILNAA
HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWIALFPGLALMTAVFCFNLLGDGLRDIF
CHHHEECCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPQRRT
CCCCCC
>Mature Secondary Structure 
SSVAPPITEPAKPSTAAKPVRRSGLVEMIAHTRYVLGDNRVTAFAFGLLVVIVFAALFG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
PYIVPYDPLASNTAQALKPPSAANWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLM
CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVLAMGIVAALGNTVQNIIIATAIVNFPL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YARVARAEANVRREAGFVMAARLSGNSEMRILLVHILPNIMPIMIVQMSLTMGYAILNAA
HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWIALFPGLALMTAVFCFNLLGDGLRDIF
CHHHEECCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPQRRT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]