| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751121
Identifier: 86751121
GI number: 86751121
Start: 4579701
End: 4580654
Strand: Reverse
Name: 86751121
Synonym: RPB_4013
Alternate gene names: NA
Gene position: 4580654-4579701 (Counterclockwise)
Preceding gene: 86751124
Following gene: 86751120
Centisome position: 85.91
GC content: 63.84
Gene sequence:
>954_bases ATGAACGCAACCGCACCCACCCCCGGATCGACCGCGACGCGCAACGAAAACCCGAACCTTCCTGCACCGGTCTCCGGAGA GCGCCACGACATCGACAGCTTGGCCGGTCGGCTGACCTATTGGACCGCGTCGCCGGCGACACCGACGTCGGAGCCGCCGA TGCTTCTCGTCCACAGCATCAATGCAGCGGGATCGGCCTACGAGATGAAACCGATCTACGAGCACTACGCCAGGAGCCGC CCGGTCTACGCGATCGAGTTGCCGGGCTTTGGTCATTCCTCGCGCGCCAAGCGTCAATACACAATTCGGATGATGACGGA TGCGATCCATGCCGCCGTCGCCGAGATTCAGAAGATCCACGGCGACGCGCCGTTCGATGCGGTCGCGCTGTCGCTCGGCT GCGAGTTTCTCGGGCGCGCCGCCGACGAGACGCCGAAGGTTTTCCGCAGCGTGGCATTGGTCAGCCCGACCGGCTTCGAT CGCCGGCAGGTGCGCTGGGTGAAGGGGTCGCGGGCGATCCCGTGGCTGTATGCGATCTTCGAAAACCCGCTGTGGGGCGA GGGAATCTTCGGCCTGCTGACGAAGAAATCGGTGATCGCCTGGTTCCTGCGCAAGACCTTCGGCTCGCCGAACATCGATC AGGGACTGCTCGACTACGACTATCTGACGACGCATCAGCCCGGCGCGCAGCACGCGCCTTATTACTTCGTCTCGGGCTAT CTGTTCAGCCAGGACGTCCTGCGCATCTATCAGGACCTGAAGATGCCGGCGTGGCTGTCGCACGGCGTGCGCGGTGACTT CGTCGATTACGGCAACAAGAGCACGGTGGAAGGCCGGCCGAACTGGACCGTCACCGTGTTCCAGACCGGCGCGATGCCGC ATTTCGAAATGCCCGACGAATTCCTGCGCACCTACGACGAATTCCTCGCCCGGGTCGCCAAGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases ATTGTTATACGACAAGCGTTCTTGACGGTCTGATACACTGCGCACACCGTCTTGGCCACGTCGAGATGCGGCCGGAGTGG CCGCGAACAGGAAATTCGAG
Downstream 100 bases:
>100_bases GGCGGGGCGATGAGCGAACTCGTCTGGAGCAGGGACGGCGCCGACTGGCCGCACCGGGACGCCAGCCGGTTCGTCGAGGC CGGCGGCTTTCGCTGGCACG
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold Domain-Containing Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNATAPTPGSTATRNENPNLPAPVSGERHDIDSLAGRLTYWTASPATPTSEPPMLLVHSINAAGSAYEMKPIYEHYARSR PVYAIELPGFGHSSRAKRQYTIRMMTDAIHAAVAEIQKIHGDAPFDAVALSLGCEFLGRAADETPKVFRSVALVSPTGFD RRQVRWVKGSRAIPWLYAIFENPLWGEGIFGLLTKKSVIAWFLRKTFGSPNIDQGLLDYDYLTTHQPGAQHAPYYFVSGY LFSQDVLRIYQDLKMPAWLSHGVRGDFVDYGNKSTVEGRPNWTVTVFQTGAMPHFEMPDEFLRTYDEFLARVAKQPA
Sequences:
>Translated_317_residues MNATAPTPGSTATRNENPNLPAPVSGERHDIDSLAGRLTYWTASPATPTSEPPMLLVHSINAAGSAYEMKPIYEHYARSR PVYAIELPGFGHSSRAKRQYTIRMMTDAIHAAVAEIQKIHGDAPFDAVALSLGCEFLGRAADETPKVFRSVALVSPTGFD RRQVRWVKGSRAIPWLYAIFENPLWGEGIFGLLTKKSVIAWFLRKTFGSPNIDQGLLDYDYLTTHQPGAQHAPYYFVSGY LFSQDVLRIYQDLKMPAWLSHGVRGDFVDYGNKSTVEGRPNWTVTVFQTGAMPHFEMPDEFLRTYDEFLARVAKQPA >Mature_317_residues MNATAPTPGSTATRNENPNLPAPVSGERHDIDSLAGRLTYWTASPATPTSEPPMLLVHSINAAGSAYEMKPIYEHYARSR PVYAIELPGFGHSSRAKRQYTIRMMTDAIHAAVAEIQKIHGDAPFDAVALSLGCEFLGRAADETPKVFRSVALVSPTGFD RRQVRWVKGSRAIPWLYAIFENPLWGEGIFGLLTKKSVIAWFLRKTFGSPNIDQGLLDYDYLTTHQPGAQHAPYYFVSGY LFSQDVLRIYQDLKMPAWLSHGVRGDFVDYGNKSTVEGRPNWTVTVFQTGAMPHFEMPDEFLRTYDEFLARVAKQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35402; Mature: 35402
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATAPTPGSTATRNENPNLPAPVSGERHDIDSLAGRLTYWTASPATPTSEPPMLLVHSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCCCCCEEEEEEC NAAGSAYEMKPIYEHYARSRPVYAIELPGFGHSSRAKRQYTIRMMTDAIHAAVAEIQKIH CCCCCCEECCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHC GDAPFDAVALSLGCEFLGRAADETPKVFRSVALVSPTGFDRRQVRWVKGSRAIPWLYAIF CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHEEEEECCCCCCHHHHHHH ENPLWGEGIFGLLTKKSVIAWFLRKTFGSPNIDQGLLDYDYLTTHQPGAQHAPYYFVSGY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECH LFSQDVLRIYQDLKMPAWLSHGVRGDFVDYGNKSTVEGRPNWTVTVFQTGAMPHFEMPDE HHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHH FLRTYDEFLARVAKQPA HHHHHHHHHHHHHCCCC >Mature Secondary Structure MNATAPTPGSTATRNENPNLPAPVSGERHDIDSLAGRLTYWTASPATPTSEPPMLLVHSI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCCCCCEEEEEEC NAAGSAYEMKPIYEHYARSRPVYAIELPGFGHSSRAKRQYTIRMMTDAIHAAVAEIQKIH CCCCCCEECCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHC GDAPFDAVALSLGCEFLGRAADETPKVFRSVALVSPTGFDRRQVRWVKGSRAIPWLYAIF CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHEEEEECCCCCCHHHHHHH ENPLWGEGIFGLLTKKSVIAWFLRKTFGSPNIDQGLLDYDYLTTHQPGAQHAPYYFVSGY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECH LFSQDVLRIYQDLKMPAWLSHGVRGDFVDYGNKSTVEGRPNWTVTVFQTGAMPHFEMPDE HHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHH FLRTYDEFLARVAKQPA HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA