| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bchO [H]
Identifier: 86751120
GI number: 86751120
Start: 4578801
End: 4579691
Strand: Reverse
Name: bchO [H]
Synonym: RPB_4012
Alternate gene names: 86751120
Gene position: 4579691-4578801 (Counterclockwise)
Preceding gene: 86751121
Following gene: 86751119
Centisome position: 85.9
GC content: 70.03
Gene sequence:
>891_bases ATGAGCGAACTCGTCTGGAGCAGGGACGGCGCCGACTGGCCGCACCGGGACGCCAGCCGGTTCGTCGAGGCCGGCGGCTT TCGCTGGCACGTCCAGCAGATGGGGCCGGCGGATGCGCCGGCGCTGCTGCTGATCCACGGCACCGGCGCGGCCTCGCATT CCTGGCGCGGCCTGGCGCCGCTGCTGGCCGCGCATTTTCGCGTCGTCGTGCCGGATCTGCCGGGGCACGGCTTCACCCAG TCGCCGCGCGCGCATCGGCTGTCGCTGCCGGGCATGGCCGGCGACCTCGCCGCGCTGCTGCGGGTGCTCGGCGTGTCGCC GCAGATCGTGGTCGGGCACTCCGCAGGCGCCGCGATCGCCGCGCGGATGTGCCTCGACGGCAGCATCGCGCCGCGATTGC TGATCAGCCTCAACGGCGCGTTCCTGCCCTATGGTGGGCCGGCCGCGAACATCTTCTCGCCGCTGGCCAAGATGCTGGTG CTGAATCCCTTCGTCCCCAGCTTCTTCGCCTGGCAGGCCGGCAGCCGCGCCGCGGTCGAGCGGCTGATCGGCAATACCGG CTCGACGCTCGACCCGGTGGGAATCAGGCTCTACGGCAAACTGGTGGGCAATTCGGCCCATGTGGCCGCAGCGCTGCGCA TGATGGCGAACTGGGATCTCGAACCGCTGCTGCGGGCGCTGCCCGGTCTGAAGCCGCAGCTCGTGCTGGTCGCCGCCGAC GGCGATCGCGCGATTCCGCCCTCGGTTGCCCGTAAGGTCCAGGAAATTCAGCCGAAAGCGGTGATCGAGCGGATTCCGGG GCTGGGCCATCTGGCCCATGAAGAGCGTCCGGATCTGATCGCGGCGCTGATCGAGCGATATTCGCGTCCGGCCGGGCAAA ATGTCGAATAG
Upstream 100 bases:
>100_bases GACCGGCGCGATGCCGCATTTCGAAATGCCCGACGAATTCCTGCGCACCTACGACGAATTCCTCGCCCGGGTCGCCAAGC AGCCGGCCTGAGGCGGGGCG
Downstream 100 bases:
>100_bases ATCAAAGACAACGGTGTAAGGTTTACATTACACATTTGGACTGGTTCGGCTGTCAAATTTTCGTTACAGTGATGCCCATG CTCGATCCCGGTCTCAAACC
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSELVWSRDGADWPHRDASRFVEAGGFRWHVQQMGPADAPALLLIHGTGAASHSWRGLAPLLAAHFRVVVPDLPGHGFTQ SPRAHRLSLPGMAGDLAALLRVLGVSPQIVVGHSAGAAIAARMCLDGSIAPRLLISLNGAFLPYGGPAANIFSPLAKMLV LNPFVPSFFAWQAGSRAAVERLIGNTGSTLDPVGIRLYGKLVGNSAHVAAALRMMANWDLEPLLRALPGLKPQLVLVAAD GDRAIPPSVARKVQEIQPKAVIERIPGLGHLAHEERPDLIAALIERYSRPAGQNVE
Sequences:
>Translated_296_residues MSELVWSRDGADWPHRDASRFVEAGGFRWHVQQMGPADAPALLLIHGTGAASHSWRGLAPLLAAHFRVVVPDLPGHGFTQ SPRAHRLSLPGMAGDLAALLRVLGVSPQIVVGHSAGAAIAARMCLDGSIAPRLLISLNGAFLPYGGPAANIFSPLAKMLV LNPFVPSFFAWQAGSRAAVERLIGNTGSTLDPVGIRLYGKLVGNSAHVAAALRMMANWDLEPLLRALPGLKPQLVLVAAD GDRAIPPSVARKVQEIQPKAVIERIPGLGHLAHEERPDLIAALIERYSRPAGQNVE >Mature_295_residues SELVWSRDGADWPHRDASRFVEAGGFRWHVQQMGPADAPALLLIHGTGAASHSWRGLAPLLAAHFRVVVPDLPGHGFTQS PRAHRLSLPGMAGDLAALLRVLGVSPQIVVGHSAGAAIAARMCLDGSIAPRLLISLNGAFLPYGGPAANIFSPLAKMLVL NPFVPSFFAWQAGSRAAVERLIGNTGSTLDPVGIRLYGKLVGNSAHVAAALRMMANWDLEPLLRALPGLKPQLVLVAADG DRAIPPSVARKVQEIQPKAVIERIPGLGHLAHEERPDLIAALIERYSRPAGQNVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324392, Length=104, Percent_Identity=32.6923076923077, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR017497 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 31428; Mature: 31297
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELVWSRDGADWPHRDASRFVEAGGFRWHVQQMGPADAPALLLIHGTGAASHSWRGLAP CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHH LLAAHFRVVVPDLPGHGFTQSPRAHRLSLPGMAGDLAALLRVLGVSPQIVVGHSAGAAIA HHHHHHEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH ARMCLDGSIAPRLLISLNGAFLPYGGPAANIFSPLAKMLVLNPFVPSFFAWQAGSRAAVE HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHH RLIGNTGSTLDPVGIRLYGKLVGNSAHVAAALRMMANWDLEPLLRALPGLKPQLVLVAAD HHHCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECC GDRAIPPSVARKVQEIQPKAVIERIPGLGHLAHEERPDLIAALIERYSRPAGQNVE CCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SELVWSRDGADWPHRDASRFVEAGGFRWHVQQMGPADAPALLLIHGTGAASHSWRGLAP CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHH LLAAHFRVVVPDLPGHGFTQSPRAHRLSLPGMAGDLAALLRVLGVSPQIVVGHSAGAAIA HHHHHHEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH ARMCLDGSIAPRLLISLNGAFLPYGGPAANIFSPLAKMLVLNPFVPSFFAWQAGSRAAVE HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHH RLIGNTGSTLDPVGIRLYGKLVGNSAHVAAALRMMANWDLEPLLRALPGLKPQLVLVAAD HHHCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECC GDRAIPPSVARKVQEIQPKAVIERIPGLGHLAHEERPDLIAALIERYSRPAGQNVE CCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA