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The map label for this gene is crtB [H]

Identifier: 86751118

GI number: 86751118

Start: 4576142

End: 4577191

Strand: Reverse

Name: crtB [H]

Synonym: RPB_4010

Alternate gene names: 86751118

Gene position: 4577191-4576142 (Counterclockwise)

Preceding gene: 86751119

Following gene: 86751117

Centisome position: 85.85

GC content: 68.76

Gene sequence:

>1050_bases
ATGACCGTACATTCCGATATGCTGGCCTGCCGCGAGATGATCAAGGAAGGCTCTCGCACCTTCCACGCCGCCTCGATGGT
GCTGCCGCGCCGGATCAGCGATCCGGCGATCGCGCTGTACGCGTTCTGCCGCGTCGCCGACGATGCCGTCGATCTCGGCC
TCGATCGCACCGCTGCGGTCGAAGTGCTGAAGGACCGGCTCGATCGCGCCTGCCGCGGCCTGCCGCGGCCGTATCCGTCG
GACCGCGCTTTCGCCGACGTGATCGCGCGGTTCTCGATTCCGCCGGCGATTCCCGAGGCGCTGATCGAAGGCCTCGAATG
GGACTCGCAGGGCCGCCGCTTCGAGACGCTGTCGGATCTCTACGGCTATGCGGCGCGCGTCGCCGGCACCGTGGGGGTGA
TGATGACCCTGGTGATGGGGCAGCGCCGGCCGGACATCGTCGCGCGCGCCTGCGATCTCGGCTGCGCGATGCAGCTCACC
AACATCGCCCGCGATATCGGCGAGGACGCCCGCAACGGCCGCATCTACATGCCGCTGTCGTGGATGCGCGAGGCCGGGCT
CGATCCCGAGACCTGGCTCAAGGACCCGAAATTCACGCCGGAGATCGCCGGCATCGTCAAGCGGCTGATCGACACCGCGG
ATGCGCTGTACGATCGCGCCACGCTCGGCATCGCCAATCTGCCGCGCTCCTGCCGCCCCGGCATCTTCGCGGCGCGCGCG
CTCTACGCCGAGATCGGCCGCGAGGTCGAACGCTCCGGGCTCGATTCGGTGTCGTCGCGCGCCGTGGTCTCGACCGGGCG
CAAGCTCGCGGTGCTGGCGCGGATGCTGGCGTTCCAGGAAACCGAATGGGCGCCGGCGAAATATCTGCCGACCCGGTTCG
GCGACATGGAAGAGACTCGCTTCCTGATCGACGCCGTGATCGCCCATCCGGTCCGCGACGTGCCGCCGGCCCCGCGCGTC
AAGCCGATCGAGCAGAAAGTCGCCTGGCTGGTCGACCTGTTCACGAGGCTGGAACGCCGTGACCAGATGCTGCAGCGCAG
CCGGGTGTAG

Upstream 100 bases:

>100_bases
TCGGTGCCGGAACCCATCCCGGCGCCGGTCTGCCCGGGGTGCTGTCCTCGGCGCGTGTGCTCGATTCCCTGGTCCCCGAG
GCCGACAGTCTGGTGACGTC

Downstream 100 bases:

>100_bases
TTCGGTCCAATCTCTGCACTAACTTCGTCATGCCCGGGCTTGTCCCAGGCATCCATGAACGGCGCTCGCGCCGTGCCCGG
ACCCGTGGATGACCGGGACG

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAVEVLKDRLDRACRGLPRPYPS
DRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFETLSDLYGYAARVAGTVGVMMTLVMGQRRPDIVARACDLGCAMQLT
NIARDIGEDARNGRIYMPLSWMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGIFAARA
LYAEIGREVERSGLDSVSSRAVVSTGRKLAVLARMLAFQETEWAPAKYLPTRFGDMEETRFLIDAVIAHPVRDVPPAPRV
KPIEQKVAWLVDLFTRLERRDQMLQRSRV

Sequences:

>Translated_349_residues
MTVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAVEVLKDRLDRACRGLPRPYPS
DRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFETLSDLYGYAARVAGTVGVMMTLVMGQRRPDIVARACDLGCAMQLT
NIARDIGEDARNGRIYMPLSWMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGIFAARA
LYAEIGREVERSGLDSVSSRAVVSTGRKLAVLARMLAFQETEWAPAKYLPTRFGDMEETRFLIDAVIAHPVRDVPPAPRV
KPIEQKVAWLVDLFTRLERRDQMLQRSRV
>Mature_348_residues
TVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAVEVLKDRLDRACRGLPRPYPSD
RAFADVIARFSIPPAIPEALIEGLEWDSQGRRFETLSDLYGYAARVAGTVGVMMTLVMGQRRPDIVARACDLGCAMQLTN
IARDIGEDARNGRIYMPLSWMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGIFAARAL
YAEIGREVERSGLDSVSSRAVVSTGRKLAVLARMLAFQETEWAPAKYLPTRFGDMEETRFLIDAVIAHPVRDVPPAPRVK
PIEQKVAWLVDLFTRLERRDQMLQRSRV

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 38988; Mature: 38856

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAV
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
EVLKDRLDRACRGLPRPYPSDRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFETLSDL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHH
YGYAARVAGTVGVMMTLVMGQRRPDIVARACDLGCAMQLTNIARDIGEDARNGRIYMPLS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHH
WMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGIFAARA
HHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHH
LYAEIGREVERSGLDSVSSRAVVSTGRKLAVLARMLAFQETEWAPAKYLPTRFGDMEETR
HHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHH
FLIDAVIAHPVRDVPPAPRVKPIEQKVAWLVDLFTRLERRDQMLQRSRV
HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVHSDMLACREMIKEGSRTFHAASMVLPRRISDPAIALYAFCRVADDAVDLGLDRTAAV
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
EVLKDRLDRACRGLPRPYPSDRAFADVIARFSIPPAIPEALIEGLEWDSQGRRFETLSDL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHH
YGYAARVAGTVGVMMTLVMGQRRPDIVARACDLGCAMQLTNIARDIGEDARNGRIYMPLS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHH
WMREAGLDPETWLKDPKFTPEIAGIVKRLIDTADALYDRATLGIANLPRSCRPGIFAARA
HHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHH
LYAEIGREVERSGLDSVSSRAVVSTGRKLAVLARMLAFQETEWAPAKYLPTRFGDMEETR
HHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHH
FLIDAVIAHPVRDVPPAPRVKPIEQKVAWLVDLFTRLERRDQMLQRSRV
HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]