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The map label for this gene is crtI [H]

Identifier: 86751119

GI number: 86751119

Start: 4577188

End: 4578723

Strand: Reverse

Name: crtI [H]

Synonym: RPB_4011

Alternate gene names: 86751119

Gene position: 4578723-4577188 (Counterclockwise)

Preceding gene: 86751120

Following gene: 86751118

Centisome position: 85.88

GC content: 64.39

Gene sequence:

>1536_bases
ATGCTCGATCCCGGTCTCAAACCCGCTCCCCGTCCTTCGAATGATCGCGCGCCGCATGCGGTGGTGATCGGCTCCGGCTT
TGGCGGCTTGGCCGCTGCGGTCCGGCTCGGTGCCAAAGGGTACCGGGTCACCGTTCTTGAAAAGCTCGATGCGCCCGGCG
GCCGCGCTTACGTCCACAAGCAGGACGGCTTCACCTTCGACGCCGGCCCGACCATCGTCACCGCGCCGTATCTGTTCGAG
GAGCTGTGGACGCTGTGCGGCAAGCGGATGTCCGACGACGTCGTGCTGAAGCCGATGTCGCCGTTCTACCGCATCCGCTT
CGACGACGGCACCTTCTTCGACTATTCGGACGACCGTAACGCGGTGCTGGACCAGATCGCGAAATTCTGCCCGGACGACG
TCCCGGCCTATGACCGCTTCATGGCGGCGTCGCAGGCGATCTTCAAGGTCGGCTTCGAGCAGCTCGGCGACCAGGCGTTC
AGCCGCTTCACCGACATGCTGAAGATCGCGCCGGACATGATCAAGCTGGAGAGCTATCGCAGCGTCTTCGGCATGGTCGC
CAAGCACTTCAAGGACCCGAAGCTGCGCCAGGTGTTCAGCTTCCATCCGCTGCTGATCGGCGGCAATCCGTTCATGTCGA
GTTCGGTGTACTGCCTGATCACCTATCTCGAAAAGCAGTGGGGCGTGCATTCGGCGATGGGCGGCACCGGCGCGCTGGTC
TCCGGCCTCGTCAAGCTGATCGAAGGCCAGGGCAACACGATCCGCTATCAGCAGGACGTCCGCCGCATCGTGGTCGAGAA
CGGCGCCGCCCGCGGCGTCGAGCTCGCCGACGGCGAGGTGATCAAGGCCGATATCGTGGTGTCGAACGCCGATTCGGCCT
CGACCTATCGCTACCTGCTGGCGCCGGAGACGCGCAAGCGCTGGACCGACGCCAAGATCGAGCGCTCGCGCTATTCGATG
AGCCTGTTCGTCTGGTACTTCGGCACCAAGCGGCGCTACGACGACGTCAAGCACCACACCATCCTGCTCGGGCCGCGCTA
CAAAGAGCTGATCACCGACATTTTCTCCCGCAAGATCGTCGCCGACGATTTCAGCCTGTATCTGCACCGCCCGACCGCGA
CCGATCCGTCGCTGGCGCCGCCCGGCTGCGATACGTTCTACGTGCTGTCGCCGGTGCCGAATCTGCTCGGCGACATCGAC
TGGACCACCAAGGCCGAGAACTATCGCGCATCGATTGCGAAGATGCTCGGCGCCACCGTGCTGCCCGATCTCGAGAATCA
GGTGGTGAGTTCGAAGCTCACCACGCCGCTGGATTTCCGCGACCGGCTGTCCTCGTTCCGCGGCGCCGCATTCGGCCTCG
AGCCGGTGCTGTGGCAGAGCGCCTGGTTCAGGCCGCACAACCAGAGCGAAGACGTCAAGAATTTGTATCTCGTCGGTGCC
GGAACCCATCCCGGCGCCGGTCTGCCCGGGGTGCTGTCCTCGGCGCGTGTGCTCGATTCCCTGGTCCCCGAGGCCGACAG
TCTGGTGACGTCATGA

Upstream 100 bases:

>100_bases
CGGCCGGGCAAAATGTCGAATAGATCAAAGACAACGGTGTAAGGTTTACATTACACATTTGGACTGGTTCGGCTGTCAAA
TTTTCGTTACAGTGATGCCC

Downstream 100 bases:

>100_bases
CCGTACATTCCGATATGCTGGCCTGCCGCGAGATGATCAAGGAAGGCTCTCGCACCTTCCACGCCGCCTCGATGGTGCTG
CCGCGCCGGATCAGCGATCC

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MLDPGLKPAPRPSNDRAPHAVVIGSGFGGLAAAVRLGAKGYRVTVLEKLDAPGGRAYVHKQDGFTFDAGPTIVTAPYLFE
ELWTLCGKRMSDDVVLKPMSPFYRIRFDDGTFFDYSDDRNAVLDQIAKFCPDDVPAYDRFMAASQAIFKVGFEQLGDQAF
SRFTDMLKIAPDMIKLESYRSVFGMVAKHFKDPKLRQVFSFHPLLIGGNPFMSSSVYCLITYLEKQWGVHSAMGGTGALV
SGLVKLIEGQGNTIRYQQDVRRIVVENGAARGVELADGEVIKADIVVSNADSASTYRYLLAPETRKRWTDAKIERSRYSM
SLFVWYFGTKRRYDDVKHHTILLGPRYKELITDIFSRKIVADDFSLYLHRPTATDPSLAPPGCDTFYVLSPVPNLLGDID
WTTKAENYRASIAKMLGATVLPDLENQVVSSKLTTPLDFRDRLSSFRGAAFGLEPVLWQSAWFRPHNQSEDVKNLYLVGA
GTHPGAGLPGVLSSARVLDSLVPEADSLVTS

Sequences:

>Translated_511_residues
MLDPGLKPAPRPSNDRAPHAVVIGSGFGGLAAAVRLGAKGYRVTVLEKLDAPGGRAYVHKQDGFTFDAGPTIVTAPYLFE
ELWTLCGKRMSDDVVLKPMSPFYRIRFDDGTFFDYSDDRNAVLDQIAKFCPDDVPAYDRFMAASQAIFKVGFEQLGDQAF
SRFTDMLKIAPDMIKLESYRSVFGMVAKHFKDPKLRQVFSFHPLLIGGNPFMSSSVYCLITYLEKQWGVHSAMGGTGALV
SGLVKLIEGQGNTIRYQQDVRRIVVENGAARGVELADGEVIKADIVVSNADSASTYRYLLAPETRKRWTDAKIERSRYSM
SLFVWYFGTKRRYDDVKHHTILLGPRYKELITDIFSRKIVADDFSLYLHRPTATDPSLAPPGCDTFYVLSPVPNLLGDID
WTTKAENYRASIAKMLGATVLPDLENQVVSSKLTTPLDFRDRLSSFRGAAFGLEPVLWQSAWFRPHNQSEDVKNLYLVGA
GTHPGAGLPGVLSSARVLDSLVPEADSLVTS
>Mature_511_residues
MLDPGLKPAPRPSNDRAPHAVVIGSGFGGLAAAVRLGAKGYRVTVLEKLDAPGGRAYVHKQDGFTFDAGPTIVTAPYLFE
ELWTLCGKRMSDDVVLKPMSPFYRIRFDDGTFFDYSDDRNAVLDQIAKFCPDDVPAYDRFMAASQAIFKVGFEQLGDQAF
SRFTDMLKIAPDMIKLESYRSVFGMVAKHFKDPKLRQVFSFHPLLIGGNPFMSSSVYCLITYLEKQWGVHSAMGGTGALV
SGLVKLIEGQGNTIRYQQDVRRIVVENGAARGVELADGEVIKADIVVSNADSASTYRYLLAPETRKRWTDAKIERSRYSM
SLFVWYFGTKRRYDDVKHHTILLGPRYKELITDIFSRKIVADDFSLYLHRPTATDPSLAPPGCDTFYVLSPVPNLLGDID
WTTKAENYRASIAKMLGATVLPDLENQVVSSKLTTPLDFRDRLSSFRGAAFGLEPVLWQSAWFRPHNQSEDVKNLYLVGA
GTHPGAGLPGVLSSARVLDSLVPEADSLVTS

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56638; Mature: 56638

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPGLKPAPRPSNDRAPHAVVIGSGFGGLAAAVRLGAKGYRVTVLEKLDAPGGRAYVHK
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEC
QDGFTFDAGPTIVTAPYLFEELWTLCGKRMSDDVVLKPMSPFYRIRFDDGTFFDYSDDRN
CCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCEEECCCCCHH
AVLDQIAKFCPDDVPAYDRFMAASQAIFKVGFEQLGDQAFSRFTDMLKIAPDMIKLESYR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
SVFGMVAKHFKDPKLRQVFSFHPLLIGGNPFMSSSVYCLITYLEKQWGVHSAMGGTGALV
HHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHH
SGLVKLIEGQGNTIRYQQDVRRIVVENGAARGVELADGEVIKADIVVSNADSASTYRYLL
HHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEECCCCCCCEEEEE
APETRKRWTDAKIERSRYSMSLFVWYFGTKRRYDDVKHHTILLGPRYKELITDIFSRKIV
CCCHHHHCCHHHHHHHHCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHE
ADDFSLYLHRPTATDPSLAPPGCDTFYVLSPVPNLLGDIDWTTKAENYRASIAKMLGATV
ECCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
LPDLENQVVSSKLTTPLDFRDRLSSFRGAAFGLEPVLWQSAWFRPHNQSEDVKNLYLVGA
CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
GTHPGAGLPGVLSSARVLDSLVPEADSLVTS
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MLDPGLKPAPRPSNDRAPHAVVIGSGFGGLAAAVRLGAKGYRVTVLEKLDAPGGRAYVHK
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEC
QDGFTFDAGPTIVTAPYLFEELWTLCGKRMSDDVVLKPMSPFYRIRFDDGTFFDYSDDRN
CCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCEEECCCCCHH
AVLDQIAKFCPDDVPAYDRFMAASQAIFKVGFEQLGDQAFSRFTDMLKIAPDMIKLESYR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
SVFGMVAKHFKDPKLRQVFSFHPLLIGGNPFMSSSVYCLITYLEKQWGVHSAMGGTGALV
HHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHH
SGLVKLIEGQGNTIRYQQDVRRIVVENGAARGVELADGEVIKADIVVSNADSASTYRYLL
HHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEECCCCEEEEEEEEECCCCCCCEEEEE
APETRKRWTDAKIERSRYSMSLFVWYFGTKRRYDDVKHHTILLGPRYKELITDIFSRKIV
CCCHHHHCCHHHHHHHHCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHE
ADDFSLYLHRPTATDPSLAPPGCDTFYVLSPVPNLLGDIDWTTKAENYRASIAKMLGATV
ECCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
LPDLENQVVSSKLTTPLDFRDRLSSFRGAAFGLEPVLWQSAWFRPHNQSEDVKNLYLVGA
CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
GTHPGAGLPGVLSSARVLDSLVPEADSLVTS
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]