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The map label for this gene is pufL [H]

Identifier: 86751103

GI number: 86751103

Start: 4562801

End: 4563634

Strand: Reverse

Name: pufL [H]

Synonym: RPB_3995

Alternate gene names: 86751103

Gene position: 4563634-4562801 (Counterclockwise)

Preceding gene: 86751104

Following gene: 86751102

Centisome position: 85.6

GC content: 60.07

Gene sequence:

>834_bases
ATGGCAATGCTCAGTTTTGAGAAAAAATACCGCGTTCGTGGCGGAACGCTAATCGGAGGCGACCTATTCGATTTCTGGGT
CGGTCCGTTCTATGTCGGGTTTTTCGGCGTCGCGACGGTGTTCTGCGCCCTGATGGGGACTGCGCTGATCATCTGGAATA
CCGCGCTCGGCCCGACCTGGGTTCTTTGGCAGATCAGCGTCAACCCGCCGGATGCCAAATACGGCCTGGGTTTCGCTCCG
CTCGCCGAAGGCGGCATCTGGCAGTGGGTCTCGATCTTCGCGACCGGCGCGTTCGTTTCGTGGGCGCTTCGTGAAGTCGA
AATCTGCCGCAAGCTCGGCATCGGCTATCACGTGCCGTTCGCCTTCAGCTTCGCGATTTTCGCTTACGTTACGCTGGTTG
TGATTCGTCCGGTTCTGATGGGCTCCTGGAGCTACGGCTTCCCCTACGGCATCTTCACGCATCTCGATTGGGTGTCGAAC
ACGGGCTATGCCTACGGCCAGTTCCACTACAATCCCGCGCACATGATCGCGATCACCTTCTTCTTCACGACATGTCTGGC
GCTAGCGCTGCATGGCGGCCTCGTTCTGTCGGCCCTGAATCCGGACCGTGGCGAGCCCGTCAAGTCGCCCGAGCACGAGA
ACACCATCTTCCGCGACCTCGTCGGCTATTCGATCGGCACTATCGGCATTCACCGCCTGGGCCTGTTTCTGGCGCTCGCG
GCCGTTTTCTTCAGCGCGGTCTGCATGATCATCAGCGGTCCGGTGCTCGCCGAAGGTGGTTCGTGGCCGGATTGGTGGAA
TTGGTGGCGCACCCTGCCGATCTGGAACTCGTAA

Upstream 100 bases:

>100_bases
GGAAACGGACCCACCTGCCGGGCCCGTCCGCTTCCGGGAAGCGATTTCACCTGGATCACTACGATGGATTATCCCTGGCG
CGCTCGCGGAGGAACGATCG

Downstream 100 bases:

>100_bases
TTCAACCGGTCACAAGAGAGTCTTGTCATGGCCCAATATCAGAACATCTTCACGCAGGTCCAGGTTGAAGGACCTGCCTA
TGCGGGGGTGCCGCTACGAC

Product: photosynthetic reaction center subunit L

Products: NA

Alternate protein names: Photosynthetic reaction center L subunit [H]

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVATVFCALMGTALIIWNTALGPTWVLWQISVNPPDAKYGLGFAP
LAEGGIWQWVSIFATGAFVSWALREVEICRKLGIGYHVPFAFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSN
TGYAYGQFHYNPAHMIAITFFFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTIFRDLVGYSIGTIGIHRLGLFLALA
AVFFSAVCMIISGPVLAEGGSWPDWWNWWRTLPIWNS

Sequences:

>Translated_277_residues
MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVATVFCALMGTALIIWNTALGPTWVLWQISVNPPDAKYGLGFAP
LAEGGIWQWVSIFATGAFVSWALREVEICRKLGIGYHVPFAFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSN
TGYAYGQFHYNPAHMIAITFFFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTIFRDLVGYSIGTIGIHRLGLFLALA
AVFFSAVCMIISGPVLAEGGSWPDWWNWWRTLPIWNS
>Mature_276_residues
AMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVATVFCALMGTALIIWNTALGPTWVLWQISVNPPDAKYGLGFAPL
AEGGIWQWVSIFATGAFVSWALREVEICRKLGIGYHVPFAFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSNT
GYAYGQFHYNPAHMIAITFFFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTIFRDLVGYSIGTIGIHRLGLFLALAA
VFFSAVCMIISGPVLAEGGSWPDWWNWWRTLPIWNS

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005871
- InterPro:   IPR000484 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 30805; Mature: 30674

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVATVFCALMGTALIIWNTALGPTW
CCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
VLWQISVNPPDAKYGLGFAPLAEGGIWQWVSIFATGAFVSWALREVEICRKLGIGYHVPF
EEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSNTGYAYGQFHYNPAHMIAITF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHH
FFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTIFRDLVGYSIGTIGIHRLGLFLALA
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFFSAVCMIISGPVLAEGGSWPDWWNWWRTLPIWNS
HHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
AMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGFFGVATVFCALMGTALIIWNTALGPTW
CCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
VLWQISVNPPDAKYGLGFAPLAEGGIWQWVSIFATGAFVSWALREVEICRKLGIGYHVPF
EEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSNTGYAYGQFHYNPAHMIAITF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHH
FFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTIFRDLVGYSIGTIGIHRLGLFLALA
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFFSAVCMIISGPVLAEGGSWPDWWNWWRTLPIWNS
HHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA