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The map label for this gene is pufM [H]

Identifier: 86751102

GI number: 86751102

Start: 4561850

End: 4562773

Strand: Reverse

Name: pufM [H]

Synonym: RPB_3994

Alternate gene names: 86751102

Gene position: 4562773-4561850 (Counterclockwise)

Preceding gene: 86751103

Following gene: 86751101

Centisome position: 85.58

GC content: 63.74

Gene sequence:

>924_bases
ATGGCCCAATATCAGAACATCTTCACGCAGGTCCAGGTTGAAGGACCTGCCTATGCGGGGGTGCCGCTACGACCCGGCAG
TTCCCCCCGCGAGACCAAGACCACCTTCAGCTACTGGCTCGGAAAGCTCGGCGATGCGCAGGTGGGTCCGATCTATCTCG
GCTTCACCGGGATCTGTTCGGTGCTGTGCGGCTTCGTCGCGATCGAGATCATCGGCCTCAACATGTTGGCGGCGGTGGAC
TGGAGTCCGATCGAATTCCTGCGCCAGTTCTGCTGGCTCGCGCTCGAGCCGCCGAAGCCGGAATACGGTCTGTCGATCCC
GCCGCTCAAGGAAGGCGGCTGGTGGCTGATGGCCGGCTTCTTCCTGACGGTGTCCATCGTGCTGTGGTGGGTCCGCACCT
ATCGCCGCGCGCGGGCGCTCGGCATGGGGACCCACGTGTCGTGGGCGTTCGCTTCGGCGATCCTGTTGTACCTCGCCATC
GGCTTCATTCAGCCGCTGCTGATGGGCACCTGGAGCGAAGCTCCGCCGTTCGGCATCTTCCCGCACCTCGACTGGACCAA
CAACTTCTCGATCAAGTACGGCAATCTCTACTACAACCCCTTCCACTGTCTCTCGATCGCCTTCCTGTATGGCTCGGCCC
TGCTGTTCGCCATGCACGGTGCGACCATTCTGGCCGTGAGCCGCTACGGCGGCGAGCGCGAAATCGAGCAGATGCTGGAC
CGCGGTACCGCACTTGAACGCGCTGCTCTGTTCTGGCGCTGGACGATGGGCTTCAACGCCACCGCGGAATCGATCCATCG
CTGGGCCTGGTGGTTCGCCGTTCTCACGCCGCTGACCGGCGCGATCGGCATCATCCTCACCGGTCCGGTGGTCGACAACT
GGTTCGACTGGGGTGTGAAGCACGGTCTCGCTCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
GGTGCTCGCCGAAGGTGGTTCGTGGCCGGATTGGTGGAATTGGTGGCGCACCCTGCCGATCTGGAACTCGTAATTCAACC
GGTCACAAGAGAGTCTTGTC

Downstream 100 bases:

>100_bases
GCGACCCGACATCCAGACGACACAAAGTGCGCACGCCTGATTGCAAAAATCCGATCAGGCGTGCGCTGCTAATTCAGCTC
CCCAACAGGTGTCGCCCGAG

Product: photosynthetic reaction center subunit M

Products: NA

Alternate protein names: Photosynthetic reaction center M subunit [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAQYQNIFTQVQVEGPAYAGVPLRPGSSPRETKTTFSYWLGKLGDAQVGPIYLGFTGICSVLCGFVAIEIIGLNMLAAVD
WSPIEFLRQFCWLALEPPKPEYGLSIPPLKEGGWWLMAGFFLTVSIVLWWVRTYRRARALGMGTHVSWAFASAILLYLAI
GFIQPLLMGTWSEAPPFGIFPHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLD
RGTALERAALFWRWTMGFNATAESIHRWAWWFAVLTPLTGAIGIILTGPVVDNWFDWGVKHGLAPPR

Sequences:

>Translated_307_residues
MAQYQNIFTQVQVEGPAYAGVPLRPGSSPRETKTTFSYWLGKLGDAQVGPIYLGFTGICSVLCGFVAIEIIGLNMLAAVD
WSPIEFLRQFCWLALEPPKPEYGLSIPPLKEGGWWLMAGFFLTVSIVLWWVRTYRRARALGMGTHVSWAFASAILLYLAI
GFIQPLLMGTWSEAPPFGIFPHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLD
RGTALERAALFWRWTMGFNATAESIHRWAWWFAVLTPLTGAIGIILTGPVVDNWFDWGVKHGLAPPR
>Mature_306_residues
AQYQNIFTQVQVEGPAYAGVPLRPGSSPRETKTTFSYWLGKLGDAQVGPIYLGFTGICSVLCGFVAIEIIGLNMLAAVDW
SPIEFLRQFCWLALEPPKPEYGLSIPPLKEGGWWLMAGFFLTVSIVLWWVRTYRRARALGMGTHVSWAFASAILLYLAIG
FIQPLLMGTWSEAPPFGIFPHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLDR
GTALERAALFWRWTMGFNATAESIHRWAWWFAVLTPLTGAIGIILTGPVVDNWFDWGVKHGLAPPR

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000484
- InterPro:   IPR005781 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 34424; Mature: 34293

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYQNIFTQVQVEGPAYAGVPLRPGSSPRETKTTFSYWLGKLGDAQVGPIYLGFTGICS
CCCHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHH
VLCGFVAIEIIGLNMLAAVDWSPIEFLRQFCWLALEPPKPEYGLSIPPLKEGGWWLMAGF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHH
FLTVSIVLWWVRTYRRARALGMGTHVSWAFASAILLYLAIGFIQPLLMGTWSEAPPFGIF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLD
CCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
RGTALERAALFWRWTMGFNATAESIHRWAWWFAVLTPLTGAIGIILTGPVVDNWFDWGVK
CCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
HGLAPPR
CCCCCCC
>Mature Secondary Structure 
AQYQNIFTQVQVEGPAYAGVPLRPGSSPRETKTTFSYWLGKLGDAQVGPIYLGFTGICS
CCHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHH
VLCGFVAIEIIGLNMLAAVDWSPIEFLRQFCWLALEPPKPEYGLSIPPLKEGGWWLMAGF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHH
FLTVSIVLWWVRTYRRARALGMGTHVSWAFASAILLYLAIGFIQPLLMGTWSEAPPFGIF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLD
CCCCCCCCCEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
RGTALERAALFWRWTMGFNATAESIHRWAWWFAVLTPLTGAIGIILTGPVVDNWFDWGVK
CCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
HGLAPPR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA