| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is linC [H]
Identifier: 86751042
GI number: 86751042
Start: 4488655
End: 4489920
Strand: Direct
Name: linC [H]
Synonym: RPB_3934
Alternate gene names: 86751042
Gene position: 4488655-4489920 (Clockwise)
Preceding gene: 86751040
Following gene: 86751043
Centisome position: 84.19
GC content: 64.38
Gene sequence:
>1266_bases ATGCACGGCACCATCGAGATCGACAACGCCGCCCGCCAGCGCGCCGCGCGCGAGGAAGCCTATGCGACGCCGCTGTCGCA ATTCCACCCCGGCGCGCCGCGGCACTTCCGCGACGACACGCTGTGGCCGTGGTTCGAGCGGCTGCGCGCCGAGGAGCCGG TGCACTACTGCACCAACGCGCCGATCGCGCCGTATTGGAGCGTGACCAAGTACAACGACATCATGCATGTCGACACCAGC CATCAGATCTTCTCGTCGGATTCGACGCTCGGCGGCATTTCGATCCGCGACGCGCCGCAGGGCTACGACTGGCCGAGCTT CATCGCGATGGACGAGCCGCGGCACTCGGCGCAGCGCAAGACGGTGTCGCCGATGTTCACGCCGGACCATCTCGACGAAC TCGCGGTGCTGATCCGCGGCCGGACGCAGAAAGTGCTCGATGGCCTGCCGCGCAACGAGACCTTCAACTTCGTCGAGCGG GTCTCGATCGAGCTGACGACGCAGATGCTGGCCACCTTGTTCGACTTCCCGTTCGCGCAGCGCCGCAAGTTGACGCGCTG GTCCGACGTCGCCACCGCGCTGCCCAAGAGCATGATCGTGGCGTCGGAGGAGGAACGCCGCAGCGAGCTGAACGAATGCG CCGCGACCTTCGCGGCGATGTGGAACGAGCGCGTCAATTCCGAGCCACGGAATGACCTGCTGTCGATGATGGCGCATCAC GACGCCACACGGCAGATGGACCGCGACAATCTGATCGGCAACATCCTGCTGTTGATCGTCGGCGGCAACGACACCACCCG CAACACCATGACCGGCTCGGTGCTGGCGCTGAACCAGAACCCGGACCAGTTCGCCAAGCTGCGCGCCAACCCGGCGCTGA TCGACACCATGGTACCCGAGGTGATCCGCTGGCAGACGCCGCTGGCGCATATGCGCCGCACCGCCTTGCAGGACACCGAA CTCGGCGGCAAGACCATCAAGAAGGGCGACCGGGTGGTGATGTGGTACGTCTCCGGCAACCGCGACGACGAGGTGATCGA GCGCCCGAACGAGTTCATCATCGACCGCAAGCGGGCGAAGATCCATTTGTCGTTCGGCTTCGGTATCCACCGCTGCGTCG GGATGCGGCTGGCCGAATTGCAACTGAAGATCGTCTGGGAAGAAATGCTCAAACGGTTCGAGCGCATTGAAGTTGTCGGG GAGCCGAAGCGGGTGTATTCGAGCTTCGTCAAGGGCTACGAGTCCTTGCCGGTTCGCATCTCATGA
Upstream 100 bases:
>100_bases CGATCCGCCGCGCTCGAGACGGCGGACGGGAGGACGGCCGATCCGCCGCATGGCGGCCCATCGGACAGAAACGCCAACGC ACAACAACCGAGGGCCCTTC
Downstream 100 bases:
>100_bases CCCCCTAAGAAAAAGAAGACAGCCTCCAAAATGAAACATCATGCCGCCGCGGAGCAGGACGAATTCCACGACATCCGCGA CGCCGTCGCCAAACTGTGTT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450 111; Cytochrome P450lin [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MHGTIEIDNAARQRAAREEAYATPLSQFHPGAPRHFRDDTLWPWFERLRAEEPVHYCTNAPIAPYWSVTKYNDIMHVDTS HQIFSSDSTLGGISIRDAPQGYDWPSFIAMDEPRHSAQRKTVSPMFTPDHLDELAVLIRGRTQKVLDGLPRNETFNFVER VSIELTTQMLATLFDFPFAQRRKLTRWSDVATALPKSMIVASEEERRSELNECAATFAAMWNERVNSEPRNDLLSMMAHH DATRQMDRDNLIGNILLLIVGGNDTTRNTMTGSVLALNQNPDQFAKLRANPALIDTMVPEVIRWQTPLAHMRRTALQDTE LGGKTIKKGDRVVMWYVSGNRDDEVIERPNEFIIDRKRAKIHLSFGFGIHRCVGMRLAELQLKIVWEEMLKRFERIEVVG EPKRVYSSFVKGYESLPVRIS
Sequences:
>Translated_421_residues MHGTIEIDNAARQRAAREEAYATPLSQFHPGAPRHFRDDTLWPWFERLRAEEPVHYCTNAPIAPYWSVTKYNDIMHVDTS HQIFSSDSTLGGISIRDAPQGYDWPSFIAMDEPRHSAQRKTVSPMFTPDHLDELAVLIRGRTQKVLDGLPRNETFNFVER VSIELTTQMLATLFDFPFAQRRKLTRWSDVATALPKSMIVASEEERRSELNECAATFAAMWNERVNSEPRNDLLSMMAHH DATRQMDRDNLIGNILLLIVGGNDTTRNTMTGSVLALNQNPDQFAKLRANPALIDTMVPEVIRWQTPLAHMRRTALQDTE LGGKTIKKGDRVVMWYVSGNRDDEVIERPNEFIIDRKRAKIHLSFGFGIHRCVGMRLAELQLKIVWEEMLKRFERIEVVG EPKRVYSSFVKGYESLPVRIS >Mature_421_residues MHGTIEIDNAARQRAAREEAYATPLSQFHPGAPRHFRDDTLWPWFERLRAEEPVHYCTNAPIAPYWSVTKYNDIMHVDTS HQIFSSDSTLGGISIRDAPQGYDWPSFIAMDEPRHSAQRKTVSPMFTPDHLDELAVLIRGRTQKVLDGLPRNETFNFVER VSIELTTQMLATLFDFPFAQRRKLTRWSDVATALPKSMIVASEEERRSELNECAATFAAMWNERVNSEPRNDLLSMMAHH DATRQMDRDNLIGNILLLIVGGNDTTRNTMTGSVLALNQNPDQFAKLRANPALIDTMVPEVIRWQTPLAHMRRTALQDTE LGGKTIKKGDRVVMWYVSGNRDDEVIERPNEFIIDRKRAKIHLSFGFGIHRCVGMRLAELQLKIVWEEMLKRFERIEVVG EPKRVYSSFVKGYESLPVRIS
Specific function: Catalyzes the 8-methyl hydroxylation of linalool [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.99.28 [H]
Molecular weight: Translated: 48362; Mature: 48362
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGTIEIDNAARQRAAREEAYATPLSQFHPGAPRHFRDDTLWPWFERLRAEEPVHYCTNA CCCEEECCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCC PIAPYWSVTKYNDIMHVDTSHQIFSSDSTLGGISIRDAPQGYDWPSFIAMDEPRHSAQRK CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCEEECCCCCCCCCCCEEEECCCHHHHHHC TVSPMFTPDHLDELAVLIRGRTQKVLDGLPRNETFNFVERVSIELTTQMLATLFDFPFAQ CCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH RRKLTRWSDVATALPKSMIVASEEERRSELNECAATFAAMWNERVNSEPRNDLLSMMAHH HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DATRQMDRDNLIGNILLLIVGGNDTTRNTMTGSVLALNQNPDQFAKLRANPALIDTMVPE HHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHH VIRWQTPLAHMRRTALQDTELGGKTIKKGDRVVMWYVSGNRDDEVIERPNEFIIDRKRAK HHHHCCCHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCCHHHHHCCCHHEEECCCEE IHLSFGFGIHRCVGMRLAELQLKIVWEEMLKRFERIEVVGEPKRVYSSFVKGYESLPVRI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCEE S C >Mature Secondary Structure MHGTIEIDNAARQRAAREEAYATPLSQFHPGAPRHFRDDTLWPWFERLRAEEPVHYCTNA CCCEEECCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCC PIAPYWSVTKYNDIMHVDTSHQIFSSDSTLGGISIRDAPQGYDWPSFIAMDEPRHSAQRK CCCCCCCCCCCCCEEEECCCCCEECCCCCCCCEEECCCCCCCCCCCEEEECCCHHHHHHC TVSPMFTPDHLDELAVLIRGRTQKVLDGLPRNETFNFVERVSIELTTQMLATLFDFPFAQ CCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH RRKLTRWSDVATALPKSMIVASEEERRSELNECAATFAAMWNERVNSEPRNDLLSMMAHH HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DATRQMDRDNLIGNILLLIVGGNDTTRNTMTGSVLALNQNPDQFAKLRANPALIDTMVPE HHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHH VIRWQTPLAHMRRTALQDTELGGKTIKKGDRVVMWYVSGNRDDEVIERPNEFIIDRKRAK HHHHCCCHHHHHHHHHHHCCCCCHHHCCCCEEEEEEECCCCCHHHHHCCCHHEEECCCEE IHLSFGFGIHRCVGMRLAELQLKIVWEEMLKRFERIEVVGEPKRVYSSFVKGYESLPVRI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCCEE S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8376348; 2295633; 3813557; 2578028; 1610873; 12237225 [H]