Click here to switch to the map view.

The map label for this gene is livH [H]

Identifier: 86750791

GI number: 86750791

Start: 4220618

End: 4221535

Strand: Direct

Name: livH [H]

Synonym: RPB_3681

Alternate gene names: 86750791

Gene position: 4220618-4221535 (Clockwise)

Preceding gene: 86750780

Following gene: 86750792

Centisome position: 79.16

GC content: 62.64

Gene sequence:

>918_bases
ATGGATTATTTCGCTCAGCAGCTCATCAACGGCCTCGTCCTCGGCTCGATCTACGGCCTGATCGCGATCGGCTACACGAT
GGTCTACGGCATCGTCGGCATGATCAATTTCGCCCATGGTGACATTTTCATGATCGGCGGCTTCATCGCCCTGATCAGCT
TCCTGATCCTGGTGTCGTTCGGCCTCACCTTCGTGCCGCTGATCCTGCTGGTGGTGCTGCTGGTGTCGATGGCGATCACG
GCGCTGTACGGCTGGACGGTCGAGCGCATCGCCTATCGCCCGCTGCGGAATTCGTTCCGGCTCGCGCCGATGCTGTCGGC
GATCGGCATGTCGTTCGTGCTGATGAATTTCGCGCAGGTCGCCCAGGGCGCCCGAGTCAAGCCGGTGCCGCCGATCATCA
CCGGCGGCTACACGCTTCACGAGAGCGCCGACGGCTTCAACGTTCAGCTTTCCAATGTGCAGATCGTGGTGGTGATCACC
ACGATCGTGCTGCTCGCGATCTTCACATGGCTGGTGGCGAAAACCCGGCTCGGCCGCGACATGCGCGCCTGCGAGCAGGA
CCGGACCATGGCCTCGCTGCTCGGCGTCGACGTCGACCGCACCATCTCGATGACCTTCGTGATCGGCGCCGCGCTCGCCT
CGGTCGCGGGCATGATGTACCTGCTGTATTACGGCTTGGTCGATTTCTTCATGGGATTCGTCGCCGGCATCAAGGCGTTC
ACCGCGGCCGTGCTCGGCGGCATCGGTTCGCTGCCCGGCGCGATGCTCGGCGGCCTGCTGATCGGGCTGATCGAGACGTT
CTGGTCGGCCTATTTCTCGGTCGAGTACAAGGACGTCGCGGCGTTCTCGATCCTCATCGTCGTGTTGATCTTCATGCCGA
CCGGCCTGCTGGGCCGGCCGGAAGTCGAAAAAGTCTGA

Upstream 100 bases:

>100_bases
CGCGTCTCCAGCGCGGCGGGTGCCTGACAGCGGCTCGCATCGCCGGTGAGACTTCGCCTATGAGATTTGGATCCATTCGG
ACCTCAGACCACGGCAGCGC

Downstream 100 bases:

>100_bases
GCGGGCGCAGTGGCTCATCCCGTTCACGCCGCCGCTGCCACCGCCGCCAAACCGGCCGCGAATATCGGTTTCATCCTCAA
GAAAGCCCTGATCAGCGCCC

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein H [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPLILLVVLLVSMAIT
ALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQVAQGARVKPVPPIITGGYTLHESADGFNVQLSNVQIVVVIT
TIVLLAIFTWLVAKTRLGRDMRACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFMGFVAGIKAF
TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFSILIVVLIFMPTGLLGRPEVEKV

Sequences:

>Translated_305_residues
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPLILLVVLLVSMAIT
ALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQVAQGARVKPVPPIITGGYTLHESADGFNVQLSNVQIVVVIT
TIVLLAIFTWLVAKTRLGRDMRACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFMGFVAGIKAF
TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFSILIVVLIFMPTGLLGRPEVEKV
>Mature_305_residues
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSFGLTFVPLILLVVLLVSMAIT
ALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQVAQGARVKPVPPIITGGYTLHESADGFNVQLSNVQIVVVIT
TIVLLAIFTWLVAKTRLGRDMRACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFMGFVAGIKAF
TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFSILIVVLIFMPTGLLGRPEVEKV

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=303, Percent_Identity=50.1650165016502, Blast_Score=294, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32947; Mature: 32947

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLTFVPLILLVVLLVSMAITALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGARVKPVPPIITGGYTLHESADGFNVQLSNVQIVVVITTIVLLAIFTWLVAKTRLGRD
HCCCCCCCCCCEEECCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
MRACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFMGFVAGIKAF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFSILIVVLIFMPTGLLGRP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
EVEKV
CCCCC
>Mature Secondary Structure
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLTFVPLILLVVLLVSMAITALYGWTVERIAYRPLRNSFRLAPMLSAIGMSFVLMNFAQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGARVKPVPPIITGGYTLHESADGFNVQLSNVQIVVVITTIVLLAIFTWLVAKTRLGRD
HCCCCCCCCCCEEECCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
MRACEQDRTMASLLGVDVDRTISMTFVIGAALASVAGMMYLLYYGLVDFFMGFVAGIKAF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAVLGGIGSLPGAMLGGLLIGLIETFWSAYFSVEYKDVAAFSILIVVLIFMPTGLLGRP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
EVEKV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]