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The map label for this gene is arnC [H]

Identifier: 86750768

GI number: 86750768

Start: 4199472

End: 4200605

Strand: Reverse

Name: arnC [H]

Synonym: RPB_3658

Alternate gene names: 86750768

Gene position: 4200605-4199472 (Counterclockwise)

Preceding gene: 86750770

Following gene: 86750767

Centisome position: 78.79

GC content: 64.02

Gene sequence:

>1134_bases
ATGAATCAAGCCAGTCCAGCGGCCTTGGAAACGTGCGCGGCGCCATCGTCCGCGCTTCAGTTGTCCGTCGTCGTTCCCAC
CTTCAACGAGCGCGACAATGTCGAGGTGCTGTTCCACAAGCTGGAAACGGCACTCGCGGGCGTGGCTTGGGAAGTCATCT
TCGTCGACGACAACTCGCCGGACGGCACTTGGAACGTGGTGCGCGAACTGGCGCTGCGCGAACCGCGGGTGCGTTGCATC
CGGCGGATCGGGCGACGCGGGCTTTCCGGCGCCTGTATCGAGGGCATTCTCGCCGCCAGCGCGCCGTTTGCCGCGGTGAT
GGATGCCGACCTGCAGCACGACGAGACTCAACTGCCCAAGATGCTCGGCCTGGTCGAAAGCGGCTCGGCCGATCTCGTGG
TCGGCAGCCGCTATGTGGCAGGCGGCAGCGCCGACAGCTTCGACCGGCAGCGGGCCGGCTTCAGTGCGCTGGCGACCGCG
CTGGCCCGCAAGGTCCTCAAGGTCGAGGTCGCCGATCCAATGAGCGGCTTCTTCATGATCCGGCGCGATCGTTTCGAAGA
GCTTGCGCCGAAGCTTTCGACCCAGGGCTTCAAGATCCTGCTCGACGTCGTCGCCACCGGGCAGGGCAGCCTGCGCACCA
TCGAGGTGCCTTACAGCTTCGGATCCCGGCTGCACGGCGAAAGCAAGCTCGACTCGATGGTGGCGCTGGATTTCCTCGGC
CTGGTGCTGGCGAAGTTCAGCAACGATATCCTATCCCTTCGGTTCATCCTTTTCGCGCTGGTGGGCTCGACCGGCGTCAT
CGTGCATTTCCTGACGCTGTACCTGGTGCTGAAGGTGTTCGAGCAGCCGTTCGCCGAGGCACAGGGCGCCGCGGCTGTCG
TGGCGATGACCAGCAACTTCATCCTCAACAACTTCCTGACCTATCGCGACCAGCGACTGAAGGGGTTTGCCATCCTTCGC
GGGTTGTTGCTGTTCTATCTGGTGTGCGGCGTCGGTCTGCTCGCCAATGTCGGCGTCGCCTTCGCGGTTTACAATGAGCA
CATCACTTGGTGGCTGGCGGGGGCTGCCGGCGCGGTGATGGGCGTGGTGTGGAACTACGCGATGTCGGGCCTGTTCGTCT
GGCGCAAGCGTTGA

Upstream 100 bases:

>100_bases
ACTGAACGCCCCGTCTCCACCCGTTTTCCGCCTTCTGCTACATATTTTGTAACGCAACGCGCCTTGGCAGCGCCCATCGG
CCTCGATATACGCTGGCGCC

Downstream 100 bases:

>100_bases
TGCAGCCATGACGGCGGCCAAGCGCTACGTCGGTGGTACGGCTCTGGCGATCGCCGCGATGGTGGCGCTGCGGCTGGTCG
CTGCGGCGGTCACGCCGCTG

Product: dolichyl-phosphate beta-D-mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNQASPAALETCAAPSSALQLSVVVPTFNERDNVEVLFHKLETALAGVAWEVIFVDDNSPDGTWNVVRELALREPRVRCI
RRIGRRGLSGACIEGILAASAPFAAVMDADLQHDETQLPKMLGLVESGSADLVVGSRYVAGGSADSFDRQRAGFSALATA
LARKVLKVEVADPMSGFFMIRRDRFEELAPKLSTQGFKILLDVVATGQGSLRTIEVPYSFGSRLHGESKLDSMVALDFLG
LVLAKFSNDILSLRFILFALVGSTGVIVHFLTLYLVLKVFEQPFAEAQGAAAVVAMTSNFILNNFLTYRDQRLKGFAILR
GLLLFYLVCGVGLLANVGVAFAVYNEHITWWLAGAAGAVMGVVWNYAMSGLFVWRKR

Sequences:

>Translated_377_residues
MNQASPAALETCAAPSSALQLSVVVPTFNERDNVEVLFHKLETALAGVAWEVIFVDDNSPDGTWNVVRELALREPRVRCI
RRIGRRGLSGACIEGILAASAPFAAVMDADLQHDETQLPKMLGLVESGSADLVVGSRYVAGGSADSFDRQRAGFSALATA
LARKVLKVEVADPMSGFFMIRRDRFEELAPKLSTQGFKILLDVVATGQGSLRTIEVPYSFGSRLHGESKLDSMVALDFLG
LVLAKFSNDILSLRFILFALVGSTGVIVHFLTLYLVLKVFEQPFAEAQGAAAVVAMTSNFILNNFLTYRDQRLKGFAILR
GLLLFYLVCGVGLLANVGVAFAVYNEHITWWLAGAAGAVMGVVWNYAMSGLFVWRKR
>Mature_377_residues
MNQASPAALETCAAPSSALQLSVVVPTFNERDNVEVLFHKLETALAGVAWEVIFVDDNSPDGTWNVVRELALREPRVRCI
RRIGRRGLSGACIEGILAASAPFAAVMDADLQHDETQLPKMLGLVESGSADLVVGSRYVAGGSADSFDRQRAGFSALATA
LARKVLKVEVADPMSGFFMIRRDRFEELAPKLSTQGFKILLDVVATGQGSLRTIEVPYSFGSRLHGESKLDSMVALDFLG
LVLAKFSNDILSLRFILFALVGSTGVIVHFLTLYLVLKVFEQPFAEAQGAAAVVAMTSNFILNNFLTYRDQRLKGFAILR
GLLLFYLVCGVGLLANVGVAFAVYNEHITWWLAGAAGAVMGVVWNYAMSGLFVWRKR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=31.3304721030043, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71999402, Length=226, Percent_Identity=33.1858407079646, Blast_Score=126, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6325441, Length=261, Percent_Identity=34.8659003831418, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24585265, Length=239, Percent_Identity=29.2887029288703, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 40972; Mature: 40972

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQASPAALETCAAPSSALQLSVVVPTFNERDNVEVLFHKLETALAGVAWEVIFVDDNSP
CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCC
DGTWNVVRELALREPRVRCIRRIGRRGLSGACIEGILAASAPFAAVMDADLQHDETQLPK
CCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHH
MLGLVESGSADLVVGSRYVAGGSADSFDRQRAGFSALATALARKVLKVEVADPMSGFFMI
HHHHHCCCCCCEEECCEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHEEECCCCCHHHHH
RRDRFEELAPKLSTQGFKILLDVVATGQGSLRTIEVPYSFGSRLHGESKLDSMVALDFLG
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHH
LVLAKFSNDILSLRFILFALVGSTGVIVHFLTLYLVLKVFEQPFAEAQGAAAVVAMTSNF
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
ILNNFLTYRDQRLKGFAILRGLLLFYLVCGVGLLANVGVAFAVYNEHITWWLAGAAGAVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHHHHH
GVVWNYAMSGLFVWRKR
HHHHHHHHHCEEEEECC
>Mature Secondary Structure
MNQASPAALETCAAPSSALQLSVVVPTFNERDNVEVLFHKLETALAGVAWEVIFVDDNSP
CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCC
DGTWNVVRELALREPRVRCIRRIGRRGLSGACIEGILAASAPFAAVMDADLQHDETQLPK
CCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHH
MLGLVESGSADLVVGSRYVAGGSADSFDRQRAGFSALATALARKVLKVEVADPMSGFFMI
HHHHHCCCCCCEEECCEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHEEECCCCCHHHHH
RRDRFEELAPKLSTQGFKILLDVVATGQGSLRTIEVPYSFGSRLHGESKLDSMVALDFLG
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHH
LVLAKFSNDILSLRFILFALVGSTGVIVHFLTLYLVLKVFEQPFAEAQGAAAVVAMTSNF
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
ILNNFLTYRDQRLKGFAILRGLLLFYLVCGVGLLANVGVAFAVYNEHITWWLAGAAGAVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHHHHHH
GVVWNYAMSGLFVWRKR
HHHHHHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA