| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750767
Identifier: 86750767
GI number: 86750767
Start: 4197974
End: 4199464
Strand: Reverse
Name: 86750767
Synonym: RPB_3657
Alternate gene names: NA
Gene position: 4199464-4197974 (Counterclockwise)
Preceding gene: 86750768
Following gene: 86750766
Centisome position: 78.76
GC content: 68.14
Gene sequence:
>1491_bases ATGACGGCGGCCAAGCGCTACGTCGGTGGTACGGCTCTGGCGATCGCCGCGATGGTGGCGCTGCGGCTGGTCGCTGCGGC GGTCACGCCGCTGACCTTCGACGAAGCCTATTACTGGACCTGGTCGAAGCATCTCGCCGCCTCCTATTTCGATCACCCGC CGATGGTGGCGTGGCTGATCAGGCTCGGTACCCTGATTGCCGGCGACACCGAATTCGGCGTGCGGCTGATCTCGGTGCTG CTGGCGCTGCCGATGAGCTGGGCGACCTGGCGTTCCGCGGAATTGCTGTTCGGCGGCCAGCGTCTGGCCGCGCATGCGAC ACTGCTGCTCAACGCGACGATGATGGTCTCGGTCGGCACCGTGATCGTGACGCCGGATGCGCCGCTGCTCGTGGCGTCGA GCTTCGCGCTCTACGCGCTCGCGCAGGTGCTGTCGTCGGGCAAAGGCGTGTGGTGGCTCGCGGTCGGCGTCGCGGTCGGC GCGGGGCTGCTGTCGAAATACACCGCGCTGTTCTTCGGCCCGGCGATCCTGATCTGGCTGCTGTGGGTGCCCAAACAGCG TCGCTGGCTGCTGACGCCATGGCCCTATCTGGGCGGGCTGATTGCGTTCGCGATGTTCACGCCTGTGGTGCTGTGGAACG CCGAGCATCAGTGGATCTCGTTTGCCAAGCAGCTCGGCCGCGCCAGGGTCGACGGTTTTCATCCCGGCTATCTGCTCGAA CTTGTCCCGACCCAGTTCGTGCTCGCGACCCCGCTGGTCTACATCCTCGGGTTGATGGGTTTGTACGCGCTGGCGCGTGG CGCCGGCGCGTCGGGCGCGCGCGTGCTGATCAATGCGATCGTCTGGACCATCGCGCTGTATTTCGCCTGGCAGGCGACCC ATGACCGCGTCGAGGGCAATTGGCTCGGCGCGCTGTATCCCGCCTTTGCGGTCGCCGCCGCGGTCGCCGCCGCTTTCGTG CCATGGGGACCGAGGGCGCAACGTGTGGTCGATGTCTGCCGGCGTTGGGCCGCGCCGGTCGGCGTGGTGATGTTCGTGCT GGTGGTGGTCCAGGCCAACACCGGGGTGCTGACCGGCTATCGACGCGACGCCAGCGTGCGTGCGGTCGGCGTCGGCTATC CCGAGATCGCCGCCGAGATCGCGGCGGTGCGCGAGGCGACGGGGGCGACCTGCGTGCTCGCCGACGATTACGGCAACACG GGGTGGTTGGCGTTCTATCTGCCGAAGGGCACCTGCGTGGCGCAGCGCAACGAGCGCTATCGCTGGCTTGCGGCGCCGCC GCCGAGCCCGGAGCAGCTCGCCGGCAAGCTGCTGCTGGTCGGTGAGACCAATGCCGCTGCGCACCCGGCGCTGCGGGCGA CGTTCAGCCGGATCGAGAAGGTCGGCGCGGTCGAGCGCAAGCGCGGACCGCTGTTGATCGACACCCTCGAACTCGACATC CTCGACGGTGCCAAGGGTCCGGTGCTGGACAATTCGCCGCCCGTCTATTGA
Upstream 100 bases:
>100_bases ATCACTTGGTGGCTGGCGGGGGCTGCCGGCGCGGTGATGGGCGTGGTGTGGAACTACGCGATGTCGGGCCTGTTCGTCTG GCGCAAGCGTTGATGCAGCC
Downstream 100 bases:
>100_bases AGCTGGCCGGACGCGGGTACTTTAGTCTAAACAGTTGATCCGGCAAGCTGACCGGCCTGACGTCTTTGTGCTAGAGGCTG CCGCACCCTTCGCCCGCCTG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyl Transferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family; Dolichol Monophosphate Mannose Synthase; Family; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Glycosyltransferase
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTAAKRYVGGTALAIAAMVALRLVAAAVTPLTFDEAYYWTWSKHLAASYFDHPPMVAWLIRLGTLIAGDTEFGVRLISVL LALPMSWATWRSAELLFGGQRLAAHATLLLNATMMVSVGTVIVTPDAPLLVASSFALYALAQVLSSGKGVWWLAVGVAVG AGLLSKYTALFFGPAILIWLLWVPKQRRWLLTPWPYLGGLIAFAMFTPVVLWNAEHQWISFAKQLGRARVDGFHPGYLLE LVPTQFVLATPLVYILGLMGLYALARGAGASGARVLINAIVWTIALYFAWQATHDRVEGNWLGALYPAFAVAAAVAAAFV PWGPRAQRVVDVCRRWAAPVGVVMFVLVVVQANTGVLTGYRRDASVRAVGVGYPEIAAEIAAVREATGATCVLADDYGNT GWLAFYLPKGTCVAQRNERYRWLAAPPPSPEQLAGKLLLVGETNAAAHPALRATFSRIEKVGAVERKRGPLLIDTLELDI LDGAKGPVLDNSPPVY
Sequences:
>Translated_496_residues MTAAKRYVGGTALAIAAMVALRLVAAAVTPLTFDEAYYWTWSKHLAASYFDHPPMVAWLIRLGTLIAGDTEFGVRLISVL LALPMSWATWRSAELLFGGQRLAAHATLLLNATMMVSVGTVIVTPDAPLLVASSFALYALAQVLSSGKGVWWLAVGVAVG AGLLSKYTALFFGPAILIWLLWVPKQRRWLLTPWPYLGGLIAFAMFTPVVLWNAEHQWISFAKQLGRARVDGFHPGYLLE LVPTQFVLATPLVYILGLMGLYALARGAGASGARVLINAIVWTIALYFAWQATHDRVEGNWLGALYPAFAVAAAVAAAFV PWGPRAQRVVDVCRRWAAPVGVVMFVLVVVQANTGVLTGYRRDASVRAVGVGYPEIAAEIAAVREATGATCVLADDYGNT GWLAFYLPKGTCVAQRNERYRWLAAPPPSPEQLAGKLLLVGETNAAAHPALRATFSRIEKVGAVERKRGPLLIDTLELDI LDGAKGPVLDNSPPVY >Mature_495_residues TAAKRYVGGTALAIAAMVALRLVAAAVTPLTFDEAYYWTWSKHLAASYFDHPPMVAWLIRLGTLIAGDTEFGVRLISVLL ALPMSWATWRSAELLFGGQRLAAHATLLLNATMMVSVGTVIVTPDAPLLVASSFALYALAQVLSSGKGVWWLAVGVAVGA GLLSKYTALFFGPAILIWLLWVPKQRRWLLTPWPYLGGLIAFAMFTPVVLWNAEHQWISFAKQLGRARVDGFHPGYLLEL VPTQFVLATPLVYILGLMGLYALARGAGASGARVLINAIVWTIALYFAWQATHDRVEGNWLGALYPAFAVAAAVAAAFVP WGPRAQRVVDVCRRWAAPVGVVMFVLVVVQANTGVLTGYRRDASVRAVGVGYPEIAAEIAAVREATGATCVLADDYGNTG WLAFYLPKGTCVAQRNERYRWLAAPPPSPEQLAGKLLLVGETNAAAHPALRATFSRIEKVGAVERKRGPLLIDTLELDIL DGAKGPVLDNSPPVY
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53488; Mature: 53357
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAKRYVGGTALAIAAMVALRLVAAAVTPLTFDEAYYWTWSKHLAASYFDHPPMVAWLI CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHHCCCCHHHHHHH RLGTLIAGDTEFGVRLISVLLALPMSWATWRSAELLFGGQRLAAHATLLLNATMMVSVGT HHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCHHEECCHHHHHHHHHHHHHHEEEEECE VIVTPDAPLLVASSFALYALAQVLSSGKGVWWLAVGVAVGAGLLSKYTALFFGPAILIWL EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWVPKQRRWLLTPWPYLGGLIAFAMFTPVVLWNAEHQWISFAKQLGRARVDGFHPGYLLE HHCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCHHHCCCCCCCHHHH LVPTQFVLATPLVYILGLMGLYALARGAGASGARVLINAIVWTIALYFAWQATHDRVEGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC WLGALYPAFAVAAAVAAAFVPWGPRAQRVVDVCRRWAAPVGVVMFVLVVVQANTGVLTGY CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC RRDASVRAVGVGYPEIAAEIAAVREATGATCVLADDYGNTGWLAFYLPKGTCVAQRNERY CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCE RWLAAPPPSPEQLAGKLLLVGETNAAAHPALRATFSRIEKVGAVERKRGPLLIDTLELDI EEEECCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEE LDGAKGPVLDNSPPVY ECCCCCCCCCCCCCCC >Mature Secondary Structure TAAKRYVGGTALAIAAMVALRLVAAAVTPLTFDEAYYWTWSKHLAASYFDHPPMVAWLI CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHHCCCCHHHHHHH RLGTLIAGDTEFGVRLISVLLALPMSWATWRSAELLFGGQRLAAHATLLLNATMMVSVGT HHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCHHEECCHHHHHHHHHHHHHHEEEEECE VIVTPDAPLLVASSFALYALAQVLSSGKGVWWLAVGVAVGAGLLSKYTALFFGPAILIWL EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWVPKQRRWLLTPWPYLGGLIAFAMFTPVVLWNAEHQWISFAKQLGRARVDGFHPGYLLE HHCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCHHHCCCCCCCHHHH LVPTQFVLATPLVYILGLMGLYALARGAGASGARVLINAIVWTIALYFAWQATHDRVEGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC WLGALYPAFAVAAAVAAAFVPWGPRAQRVVDVCRRWAAPVGVVMFVLVVVQANTGVLTGY CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECC RRDASVRAVGVGYPEIAAEIAAVREATGATCVLADDYGNTGWLAFYLPKGTCVAQRNERY CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCE RWLAAPPPSPEQLAGKLLLVGETNAAAHPALRATFSRIEKVGAVERKRGPLLIDTLELDI EEEECCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEE LDGAKGPVLDNSPPVY ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA