| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is yuiH [H]
Identifier: 86750742
GI number: 86750742
Start: 4168549
End: 4169214
Strand: Direct
Name: yuiH [H]
Synonym: RPB_3632
Alternate gene names: 86750742
Gene position: 4168549-4169214 (Clockwise)
Preceding gene: 86750741
Following gene: 86750743
Centisome position: 78.18
GC content: 65.17
Gene sequence:
>666_bases ATGTCCGACGATGCCGACCTTCCTCCCGACTCCAAGCTCACTCGGAGCAAGCAGCGTTGGGCGGCCGAAGGCAAATTCAT CACCGGCCGTCACGCGCGCCCGGACGAACAGCGCCTGCCGCCCGGGCAGCATCTCACGCAGGATTGGCCGGTGCTCGATC TCGGCCTGTCGCCACAGATCTCTCGCGAACGCTGGCGACTCGATGTCTACGGCTCGGTCGTGCAACCGCTGTTCTGGGAC TGGTCGCAGTTCATGGCGCAGCCGCAATCGGATTTCGTTTCGGATATCCATTGCGTCACCACATGGTCGCGCTACGACAA CCGCTGGCAAGGGCTTGCCACCCGAGCGCTGCTCGACGCCTGTCAGCCGCGCGAGCAAGCGCGCTACGTCGTGCTCCACT GCTATGATGGCTACACCACCAATTTGTCGCTGGAGGATTTCGCCGCTCCCGACGCGCTGATCGCGCATGCGTGGTCCGGC GCGCCGCTGGAGCCGGAGCACGGCGGCCCGGTGCGCCTGGTCGTGCCGCACCTGTATTTCTGGAAAAGCGCGAAATGGCT GCAGGCGATCGAAGTCCGCGACGACGATCAGCCGGGCTATTGGGAGGTCCGCGGCTATCACAACCGCGGCGACCCGTGGA CCGAGCAGCGCTACTCGGAGGATTGA
Upstream 100 bases:
>100_bases CGTCACAAAATGTGCGCTGGTCGGAAGGTACGGTTCGTGGCCCGCGCCAACTGCCGCTGCTGCTCGGCCAGCCGAGCTGA ACGAGGCCGAAAGAGACCCG
Downstream 100 bases:
>100_bases TCTGATATCGTGATTTCGGGGCACGCGCAGCGCGAATCCGAACTTCGTTCCAGGACCTCCTGATTCCGTGTCTGCGCGTC CACGCACGTATCCCGGAATG
Product: oxidoreductase, molybdopterin binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSDDADLPPDSKLTRSKQRWAAEGKFITGRHARPDEQRLPPGQHLTQDWPVLDLGLSPQISRERWRLDVYGSVVQPLFWD WSQFMAQPQSDFVSDIHCVTTWSRYDNRWQGLATRALLDACQPREQARYVVLHCYDGYTTNLSLEDFAAPDALIAHAWSG APLEPEHGGPVRLVVPHLYFWKSAKWLQAIEVRDDDQPGYWEVRGYHNRGDPWTEQRYSED
Sequences:
>Translated_221_residues MSDDADLPPDSKLTRSKQRWAAEGKFITGRHARPDEQRLPPGQHLTQDWPVLDLGLSPQISRERWRLDVYGSVVQPLFWD WSQFMAQPQSDFVSDIHCVTTWSRYDNRWQGLATRALLDACQPREQARYVVLHCYDGYTTNLSLEDFAAPDALIAHAWSG APLEPEHGGPVRLVVPHLYFWKSAKWLQAIEVRDDDQPGYWEVRGYHNRGDPWTEQRYSED >Mature_220_residues SDDADLPPDSKLTRSKQRWAAEGKFITGRHARPDEQRLPPGQHLTQDWPVLDLGLSPQISRERWRLDVYGSVVQPLFWDW SQFMAQPQSDFVSDIHCVTTWSRYDNRWQGLATRALLDACQPREQARYVVLHCYDGYTTNLSLEDFAAPDALIAHAWSGA PLEPEHGGPVRLVVPHLYFWKSAKWLQAIEVRDDDQPGYWEVRGYHNRGDPWTEQRYSED
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 25675; Mature: 25543
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDADLPPDSKLTRSKQRWAAEGKFITGRHARPDEQRLPPGQHLTQDWPVLDLGLSPQI CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHCCCCCCCCCCCCCEEEECCCCCC SRERWRLDVYGSVVQPLFWDWSQFMAQPQSDFVSDIHCVTTWSRYDNRWQGLATRALLDA CCHHEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHH CQPREQARYVVLHCYDGYTTNLSLEDFAAPDALIAHAWSGAPLEPEHGGPVRLVVPHLYF HCCCCCCCEEEEEEECCEECCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEECHHHH WKSAKWLQAIEVRDDDQPGYWEVRGYHNRGDPWTEQRYSED HCCCCHHEEEECCCCCCCCEEEEECCCCCCCCCHHHCCCCC >Mature Secondary Structure SDDADLPPDSKLTRSKQRWAAEGKFITGRHARPDEQRLPPGQHLTQDWPVLDLGLSPQI CCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHCCCCCCCCCCCCCEEEECCCCCC SRERWRLDVYGSVVQPLFWDWSQFMAQPQSDFVSDIHCVTTWSRYDNRWQGLATRALLDA CCHHEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHH CQPREQARYVVLHCYDGYTTNLSLEDFAAPDALIAHAWSGAPLEPEHGGPVRLVVPHLYF HCCCCCCCEEEEEEECCEECCCCHHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEECHHHH WKSAKWLQAIEVRDDDQPGYWEVRGYHNRGDPWTEQRYSED HCCCCHHEEEECCCCCCCCEEEEECCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]