| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750740
Identifier: 86750740
GI number: 86750740
Start: 4167056
End: 4167265
Strand: Direct
Name: 86750740
Synonym: RPB_3630
Alternate gene names: NA
Gene position: 4167056-4167265 (Clockwise)
Preceding gene: 86750739
Following gene: 86750741
Centisome position: 78.16
GC content: 60.0
Gene sequence:
>210_bases ATGTCCGAAATGCTGACCATCCATGTTGATCAGGACAAGTGCCAGGGCCATGCGCGCTGCAAGGCGCTGGCGCCCGAATT GTTCGATCTCGACGACTACGGCAACGCTCACGAGAAAGGCGACGGCGTCGTGCCCGCCGACCTGATCGACAAGGCGTGGC TCGCGAAGTCCAACTGCCCGGAAAACGCGATCGACATCACAGAAGACTGA
Upstream 100 bases:
>100_bases CCTTCCAAAGGACACTGGCGGACGTGACGCGCTGTGCTAGTCTCGGCGCGTCACGACACTCACAGATCCGCCGCCAAGGC GGACGACGAGGAAACGCCGC
Downstream 100 bases:
>100_bases TCTCGTTCATTCAAGTCGCGGCGCAGACCGTGACGCCAACGATAGCCGGAGGGAGAACGCGCAATGACCGAGCGAGCGCC TGTCACCGATTGGGCCAGCG
Product: putative ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSEMLTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCPENAIDITED
Sequences:
>Translated_69_residues MSEMLTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCPENAIDITED >Mature_68_residues SEMLTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCPENAIDITED
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7583; Mature: 7452
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMLTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCP CCCEEEEEECCHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC ENAIDITED CCCCCCCCC >Mature Secondary Structure SEMLTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADLIDKAWLAKSNCP CCEEEEEECCHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC ENAIDITED CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA