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The map label for this gene is 86750731

Identifier: 86750731

GI number: 86750731

Start: 4156411

End: 4157229

Strand: Reverse

Name: 86750731

Synonym: RPB_3621

Alternate gene names: NA

Gene position: 4157229-4156411 (Counterclockwise)

Preceding gene: 86750736

Following gene: 86750730

Centisome position: 77.97

GC content: 64.22

Gene sequence:

>819_bases
ATGACTGTTTTTGCGGCAAGTCAGCAGTCTGCGGCCGGCGCAGGGATGCTGCCCTCGCATCAGGCCCGGCTGGCCTGCCG
TGCCGGACAGGCCGACACCACCGCGGGCGTTGCGCCCGGCTATGTCCAGGGCAACCTGGCCATCCTGCCGGAGAAATTTG
CCGCGGCCTTCCACCGCTTCTGCCAGCTCAATCCGAAGCCGTGCCCGATCATCGGCATGTCGGATGTCGGCAACCCGATG
ATTCCGGCGCTCGGCCTCGACCTCGACATTCGCACCGATTTGCCGCGCTACAGGGTGTGGCGTGACGGTGAGGTGATCGA
GGAGCCGACCGACATCATGGCGCATTGGCGCGATGATCTGGTCGCCTTCGTCATCGGCTGCTCGTTTTCGTTCGAGGAAG
CGCTGCTGGCGGACGACATTGCGATCCGGCACATCGATTGCAAGGTGCGCGTTCCGATGTATCGCACCAACATCCCATGC
GCGCCGGCCGGCCCATTCGCGGGGCCGATGGTGGTATCGATGCGGCCGATGAAGCCCAAGGATGCCATCCGCGCCGTGCA
GATTACGTCGCGTTTTCCCTCGGTGCACGGTGCGCCGGTTCATATCGGCCTGCCGCAATCGATCGGCATCGCCGACATCG
CCAAACCCGACTACGGCGATCCGGTGCCGATCGCGGACGACGAATTGCCGGTGTTCTGGGCCTGCGGAGTCACTCCGCAA
GCTGTGATCGCGGCGGCGAAGGTGCCGTTCGCCATCACCCATGCGCCCGGATTGATGCTTGTCACCGACTTGAAGAACAA
GCACCTTGCGGTGCTGTGA

Upstream 100 bases:

>100_bases
AGAGATAACGGCAATTTATCGTTTCTGATCAGAAACAAAGATTAGACATTATATTAGGCTTGCGCTCCATTGCTGTCGAG
AGACTAGGCAGGGCGATGGA

Downstream 100 bases:

>100_bases
GGCCCATTGATTTCGTCCCTTGACCATCAGCGCTGGTAGCAAAGGAACTGACCCATGAAGATCAATCGCCGTCATCTCGT
GATCGGAGGCGCCGCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTVFAASQQSAAGAGMLPSHQARLACRAGQADTTAGVAPGYVQGNLAILPEKFAAAFHRFCQLNPKPCPIIGMSDVGNPM
IPALGLDLDIRTDLPRYRVWRDGEVIEEPTDIMAHWRDDLVAFVIGCSFSFEEALLADDIAIRHIDCKVRVPMYRTNIPC
APAGPFAGPMVVSMRPMKPKDAIRAVQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPVPIADDELPVFWACGVTPQ
AVIAAAKVPFAITHAPGLMLVTDLKNKHLAVL

Sequences:

>Translated_272_residues
MTVFAASQQSAAGAGMLPSHQARLACRAGQADTTAGVAPGYVQGNLAILPEKFAAAFHRFCQLNPKPCPIIGMSDVGNPM
IPALGLDLDIRTDLPRYRVWRDGEVIEEPTDIMAHWRDDLVAFVIGCSFSFEEALLADDIAIRHIDCKVRVPMYRTNIPC
APAGPFAGPMVVSMRPMKPKDAIRAVQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPVPIADDELPVFWACGVTPQ
AVIAAAKVPFAITHAPGLMLVTDLKNKHLAVL
>Mature_271_residues
TVFAASQQSAAGAGMLPSHQARLACRAGQADTTAGVAPGYVQGNLAILPEKFAAAFHRFCQLNPKPCPIIGMSDVGNPMI
PALGLDLDIRTDLPRYRVWRDGEVIEEPTDIMAHWRDDLVAFVIGCSFSFEEALLADDIAIRHIDCKVRVPMYRTNIPCA
PAGPFAGPMVVSMRPMKPKDAIRAVQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPVPIADDELPVFWACGVTPQA
VIAAAKVPFAITHAPGLMLVTDLKNKHLAVL

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family [H]

Homologues:

Organism=Homo sapiens, GI156139135, Length=237, Percent_Identity=33.3333333333333, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI156139133, Length=237, Percent_Identity=32.9113924050633, Blast_Score=130, Evalue=8e-31,
Organism=Homo sapiens, GI156139131, Length=237, Percent_Identity=32.9113924050633, Blast_Score=130, Evalue=8e-31,
Organism=Homo sapiens, GI156139129, Length=237, Percent_Identity=32.9113924050633, Blast_Score=130, Evalue=8e-31,
Organism=Homo sapiens, GI156139137, Length=236, Percent_Identity=30.5084745762712, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009906
- InterPro:   IPR016938 [H]

Pfam domain/function: PF07286 DUF1445 [H]

EC number: NA

Molecular weight: Translated: 29130; Mature: 28999

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFAASQQSAAGAGMLPSHQARLACRAGQADTTAGVAPGYVQGNLAILPEKFAAAFHRF
CEEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCEECCCEEECCHHHHHHHHHH
CQLNPKPCPIIGMSDVGNPMIPALGLDLDIRTDLPRYRVWRDGEVIEEPTDIMAHWRDDL
HCCCCCCCCEEECCCCCCCCCHHCCCCEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHH
VAFVIGCSFSFEEALLADDIAIRHIDCKVRVPMYRTNIPCAPAGPFAGPMVVSMRPMKPK
EEEEEECCCCHHHHHHHCCEEEEEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCH
DAIRAVQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPVPIADDELPVFWACGVTPQ
HHHEEEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH
AVIAAAKVPFAITHAPGLMLVTDLKNKHLAVL
HHHHHHCCCEEEECCCCEEEEEECCCCEEECC
>Mature Secondary Structure 
TVFAASQQSAAGAGMLPSHQARLACRAGQADTTAGVAPGYVQGNLAILPEKFAAAFHRF
EEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCEECCCEEECCHHHHHHHHHH
CQLNPKPCPIIGMSDVGNPMIPALGLDLDIRTDLPRYRVWRDGEVIEEPTDIMAHWRDDL
HCCCCCCCCEEECCCCCCCCCHHCCCCEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHH
VAFVIGCSFSFEEALLADDIAIRHIDCKVRVPMYRTNIPCAPAGPFAGPMVVSMRPMKPK
EEEEEECCCCHHHHHHHCCEEEEEEEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCH
DAIRAVQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPVPIADDELPVFWACGVTPQ
HHHEEEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH
AVIAAAKVPFAITHAPGLMLVTDLKNKHLAVL
HHHHHHCCCEEEECCCCEEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA