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The map label for this gene is 86750730

Identifier: 86750730

GI number: 86750730

Start: 4155106

End: 4156356

Strand: Reverse

Name: 86750730

Synonym: RPB_3620

Alternate gene names: NA

Gene position: 4156356-4155106 (Counterclockwise)

Preceding gene: 86750731

Following gene: 86750729

Centisome position: 77.96

GC content: 63.95

Gene sequence:

>1251_bases
ATGAAGATCAATCGCCGTCATCTCGTGATCGGAGGCGCCGCCAGCGCCGCCGTCCTGCCGTTCGGAACTGCCGCGCGCGC
GCAGGCCAAGGAAGTCGTGATCGGCGTGATCTATCCGCTGTCCGGCGCCAGCGCCCAGATCGGCGTCGACGCCCAGAAGG
CGTTTCAGACCGCGGCCGAACTGATCAACAACAAATACGATTTCGACCTGCCGCTGGCCCGTGACGAGGGCCTTCCCGGT
CTCGGCGGCGCCAAGGTGCGGCTGGTGTTCGCCGATCACCAAGCCGACCCGCAGAAGGGCCGCGCCGAAGCCGAGCGCCT
GATCACGCAGGAAAAGGTCAGCGCCATCGTCGGCACCTATCAGAGCGCGGTCGCCGTCACCGTCAGCCAGATCTGCGAGC
GCTACCAGGTTCCCTTCCTGTCGGCCGACAATTCGTCGCCGAGCCTGCATCGTCGCGGCCTCAAATACTATTTCCGCGCC
GCGCCGCACGACGAGATGTTCTCGCAGGCGATGTTCGACTTCTTCGATGCGCTGAAGAAGAAGGGCAAGAAGATCGAGAC
GCTGGCGCTGTTCCACGAGGACACCATTTTCGGCACCGACTCGTCGAACGCCCAGCTCAAGCTCGCCAAGGACCGTGGCT
ACAAGATCGTCGCCGATATCAAGTATCGCGCCAACTCGCCGTCGCTGACCGCCGAGGTGCAGCAACTCAAGGCGGCCGAC
GCCGACGTGCTGATGCCGTCGAGCTACACCACCGACGGCATTCTGCTGATCCGCACCATGGGCGAACTCGGCTACAAGGC
CAAGAACATCGTCGCGCAGGACGCGGGCTTCTCGGAGAAGGCGCTGTACGACGCGGTCGGCGACAAGATCCCGGGCGTGA
TCTCGCGCGGCTCGTTCTCGCTCGACCTCGCCGCCAAGCGGCCGATGGTCGGCAAGATCAACGACATGTACAAGGAGCGC
TCCGGCAAGGACTTCAACGACTACTCGTCGCGGCAGTTCATGGGCCTGATCGTGATGGCCGACGCCATCAACCGCGCCAA
ATCGACCGACGGCGAGAAGATCCGCGAGGCGCTGGTCGCCACCGACATGCCGGGCGAAAAGACCATCATGCCGTGGAAGC
AGGTGAAGTTCGACGCCGAAGGCCAGAACACCTTCGCCGACCCGGTGTTGCTGCAATATGTCGGCGGCAAGTTCGTGACG
ATCTTCCCGGAACAGGCCGCAGTCGCCGAGGCGATCTGGCCGATGCCGTAA

Upstream 100 bases:

>100_bases
GATGCTTGTCACCGACTTGAAGAACAAGCACCTTGCGGTGCTGTGAGGCCCATTGATTTCGTCCCTTGACCATCAGCGCT
GGTAGCAAAGGAACTGACCC

Downstream 100 bases:

>100_bases
GCGACGGCTCGCAGCCATTCGCCGTCATTGCGAGCGCAGCGAAGCAATCCAGAAGTTCCGAGTACGGCGCCCCTGGATTG
CTTCGTCGCTTCGCTCCTCG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKINRRHLVIGGAASAAVLPFGTAARAQAKEVVIGVIYPLSGASAQIGVDAQKAFQTAAELINNKYDFDLPLARDEGLPG
LGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIVGTYQSAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRA
APHDEMFSQAMFDFFDALKKKGKKIETLALFHEDTIFGTDSSNAQLKLAKDRGYKIVADIKYRANSPSLTAEVQQLKAAD
ADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSLDLAAKRPMVGKINDMYKER
SGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVATDMPGEKTIMPWKQVKFDAEGQNTFADPVLLQYVGGKFVT
IFPEQAAVAEAIWPMP

Sequences:

>Translated_416_residues
MKINRRHLVIGGAASAAVLPFGTAARAQAKEVVIGVIYPLSGASAQIGVDAQKAFQTAAELINNKYDFDLPLARDEGLPG
LGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIVGTYQSAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRA
APHDEMFSQAMFDFFDALKKKGKKIETLALFHEDTIFGTDSSNAQLKLAKDRGYKIVADIKYRANSPSLTAEVQQLKAAD
ADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSLDLAAKRPMVGKINDMYKER
SGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVATDMPGEKTIMPWKQVKFDAEGQNTFADPVLLQYVGGKFVT
IFPEQAAVAEAIWPMP
>Mature_416_residues
MKINRRHLVIGGAASAAVLPFGTAARAQAKEVVIGVIYPLSGASAQIGVDAQKAFQTAAELINNKYDFDLPLARDEGLPG
LGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIVGTYQSAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRA
APHDEMFSQAMFDFFDALKKKGKKIETLALFHEDTIFGTDSSNAQLKLAKDRGYKIVADIKYRANSPSLTAEVQQLKAAD
ADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSLDLAAKRPMVGKINDMYKER
SGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVATDMPGEKTIMPWKQVKFDAEGQNTFADPVLLQYVGGKFVT
IFPEQAAVAEAIWPMP

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 45379; Mature: 45379

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00447 DNA_POLYMERASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRRHLVIGGAASAAVLPFGTAARAQAKEVVIGVIYPLSGASAQIGVDAQKAFQTAAE
CCCCCEEEEEECCCCCEEECCCCHHHHHHCEEEEEEEEECCCCCEEECCCHHHHHHHHHH
LINNKYDFDLPLARDEGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIVGTY
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRAAPHDEMFSQAMFDFFDALKK
HHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCHHHHEECCCHHHHHHHHHHHHHHHHHH
KGKKIETLALFHEDTIFGTDSSNAQLKLAKDRGYKIVADIKYRANSPSLTAEVQQLKAAD
CCCEEEEEEEEECCEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCC
ADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFS
CCEECCCCCCCCCEEEEEEHHHHCCHHHHHEECCCCCCHHHHHHHHCCCCCCEECCCCEE
LDLAAKRPMVGKINDMYKERSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVA
EEHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHHHHHCCCCHHHHHHHHHH
TDMPGEKTIMPWKQVKFDAEGQNTFADPVLLQYVGGKFVTIFPEQAAVAEAIWPMP
CCCCCCCCCCCHHHEEECCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MKINRRHLVIGGAASAAVLPFGTAARAQAKEVVIGVIYPLSGASAQIGVDAQKAFQTAAE
CCCCCEEEEEECCCCCEEECCCCHHHHHHCEEEEEEEEECCCCCEEECCCHHHHHHHHHH
LINNKYDFDLPLARDEGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIVGTY
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRAAPHDEMFSQAMFDFFDALKK
HHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCHHHHEECCCHHHHHHHHHHHHHHHHHH
KGKKIETLALFHEDTIFGTDSSNAQLKLAKDRGYKIVADIKYRANSPSLTAEVQQLKAAD
CCCEEEEEEEEECCEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCC
ADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFS
CCEECCCCCCCCCEEEEEEHHHHCCHHHHHEECCCCCCHHHHHHHHCCCCCCEECCCCEE
LDLAAKRPMVGKINDMYKERSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVA
EEHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHHHHHCCCCHHHHHHHHHH
TDMPGEKTIMPWKQVKFDAEGQNTFADPVLLQYVGGKFVTIFPEQAAVAEAIWPMP
CCCCCCCCCCCHHHEEECCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA