| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is CYP107B1 [H]
Identifier: 86750723
GI number: 86750723
Start: 4148782
End: 4150014
Strand: Direct
Name: CYP107B1 [H]
Synonym: RPB_3613
Alternate gene names: 86750723
Gene position: 4148782-4150014 (Clockwise)
Preceding gene: 86750717
Following gene: 86750724
Centisome position: 77.81
GC content: 66.1
Gene sequence:
>1233_bases ATGATCAGCAATAGCTCCGCGGAGTCGATCTCCGCGCCCCCGAACGACAGCACTATTCCGCATCTCGCGATCGATCCGTT CTCGCTCGACTTCTTCGACGATCCCTACCCGGATCAGCAAACCCTGCGCGACGCCGGGCCCGTCGTCTATCTCGACAAAT GGAACGTCTACGGCGTGGCGCGCTACGCCGAGGTCCATGCGGTGCTCAATGATCCGACGACGTTCTGCTCCAGCCGCGGG GTTGGGCTCAGCGACTTCAAGAAGGAAAAGCCGTGGCGGCCGCCGAGCCTGATTCTCGAGGCCGATCCGCCGGCCCATAC GCGCCCGCGCGCGGTGCTCAGCAAGGTGCTGTCGCCGGCCACCATGAAGACCATCCGCGACGGCTTCGCGGCGGCGGCCG ACGCCAAAGTCGACGAACTGCTGCAACGTGGCTGCATCGATGCGATCGCCGATCTCGCGGAGGCCTATCCGCTATCGGTT TTTCCCGATGCGATGGGGCTGAAGCAGGAAGGTCGCGAGCATCTGCTGCCCTATGCCGGCCTGGTGTTCAACGCATTCGG GCCGCCCAATGAATTGCGCCAGACTGCGATCGAGCGCTCGGCGCCGCATCAGGCCTATGTCAACGAGCAGTGCCAGCGGC CGAACCTCGCTCCGGGTGGCTTCGGCGCCTGCATCCATGCCTTCACCGACACCGGCGAAATCACCCCGGACGAAGCGCCG CTGCTGGTGCGCTCGCTGCTGTCCGCGGGGCTGGACACGACCGTCAACGGCATCGGCGCCGCAGTGTATTGCCTGGCCCG CTTCCCCGGCGAATTGCAGCGGCTGCGCAGCGATCCGACGCTGGCGCGCAATGCATTCGAAGAAGCGGTGCGGTTCGAGA GCCCGGTGCAGACGTTTTTCCGGACGACGACGCGCGAGGTCGAGCTCGGCGGCGCGGTGATCGGCGAAGGCGAAAAGGTG CTGATGTTCCTGGGGTCCGCCAACCGCGATCCGCGACGCTGGAGCGATCCCGACCTCTACGACATCACCCGCAAGACCTC TGGCCATGTCGGCTTCGGCTCCGGCGTCCATATGTGCGTCGGCCAGTTGGTGGCGCGGCTGGAGGGCGAAGTGATGCTGT CCGCGCTCGCCCGCAAGGTCGCCGCCATCGACATCGACGGCCCGGTCAAGCGCCGCTTCAACAACACGCTGCGCGGGCTG GAAAGCCTGCCGGTCAAGCTGACTCCTGCCTGA
Upstream 100 bases:
>100_bases TCATATCGCTTTCGAAGCTGGCGGCGGACGACCAGACATAAAGACATGGCGCGCGACTTCACAAGGCCCGAAACGGCCGG ATCCGAATGGAGAGGCTCGA
Downstream 100 bases:
>100_bases GAGTACCATGCCGAGTATCACCTTCATCCATCCCGACGGCCGCAGCGAGATCGTCGACGCCGCGATCGGCGACAGCGCGA TGTTCGCGGCGCTGAACCAC
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450CVIIB1 [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MISNSSAESISAPPNDSTIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRG VGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSV FPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAP LLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKV LMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGL ESLPVKLTPA
Sequences:
>Translated_410_residues MISNSSAESISAPPNDSTIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRG VGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSV FPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAP LLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKV LMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGL ESLPVKLTPA >Mature_410_residues MISNSSAESISAPPNDSTIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVARYAEVHAVLNDPTTFCSSRG VGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPATMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSV FPDAMGLKQEGREHLLPYAGLVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAP LLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKV LMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGL ESLPVKLTPA
Specific function: Not known, probably involved in the catabolism of octane and guaiacol. It displays a weak activity in the O-dealkylation of 7-ethoxycoumarin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI193206712, Length=218, Percent_Identity=25.6880733944954, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71990269, Length=218, Percent_Identity=25.2293577981651, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44538; Mature: 44538
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNSSAESISAPPNDSTIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVA CCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCHHHHHHCCCEEEEECCCEEEHH RYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPA HHHHHHHHHCCCHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCHH TMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHCCHHHHCCHHH LVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAP HHEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHH LLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCV HHHHHEEECCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH GQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCEEECCC >Mature Secondary Structure MISNSSAESISAPPNDSTIPHLAIDPFSLDFFDDPYPDQQTLRDAGPVVYLDKWNVYGVA CCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCCCHHHHHHCCCEEEEECCCEEEHH RYAEVHAVLNDPTTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRPRAVLSKVLSPA HHHHHHHHHCCCHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCHH TMKTIRDGFAAAADAKVDELLQRGCIDAIADLAEAYPLSVFPDAMGLKQEGREHLLPYAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHCCHHHHCCHHH LVFNAFGPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGFGACIHAFTDTGEITPDEAP HHEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHH LLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNAFEEAVRFESPVQTFF HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRKTSGHVGFGSGVHMCV HHHHHEEECCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH GQLVARLEGEVMLSALARKVAAIDIDGPVKRRFNNTLRGLESLPVKLTPA HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732208 [H]