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The map label for this gene is trg [C]

Identifier: 86750720

GI number: 86750720

Start: 4145184

End: 4146875

Strand: Reverse

Name: trg [C]

Synonym: RPB_3610

Alternate gene names: 86750720

Gene position: 4146875-4145184 (Counterclockwise)

Preceding gene: 86750721

Following gene: 86750719

Centisome position: 77.78

GC content: 65.54

Gene sequence:

>1692_bases
ATGTTTTCCAGACTGTCGATCCGCGCCAAGATCACGATCGTGGTGGCGTTCATGCTGGTGACGATGTCCGTGTTGGGCGC
TGTCGCCGTGCAGAAGCTGTACGCGATGAACGCCAGCACCGAAGACATAGCCACCAACTGGCTGCCGAGCGTTCGGGTGC
TCGGCGAACTGAGGGCCGGGGGCATCACCTACCGCAACGTCATTCGCCAGCACATGCTGTCCTTCGCGGCCGAAGAGAAG
CAGGCGATGGAGAAAACCCTCGAGACCGTCAAGGGCAACATCGCGAAATCGCGGGCGGCCTATGAACCGCTGATCACCAC
GCCTGCAGAACGCGCGCTCTATCAGGAATGGTCCGGGCTGTGGGGAGACTACGTCCGGGCGACCGAGGAGGTGCTCAACC
GATCCCGCGCCGATATCGGCAAGGTCTCGCAGGAGACCCGTGATTTCAATGCCAAGACCGCGAACCCGATCGGCGTGAAG
GCGGACGACGTGCTGCAGAAGGATATCGCCCTGAACAACGCTGGCGCCGACGCGGCGACCAAGTCCGCCGAGCAGACGTT
CCGTTCGGCGATGGTCATGTTCGTCAGCATCCTCGTTCTCGCCGCGGCCGCCAGCATCGGTCTCGGCATATTCCTGATCC
GCGACGTGTCGCGCGGCATTTCCTCGATCATTCAGCCGATGCAGGCGCTCGGCCGTGGCGACCTCACCGCGACCGTGCCG
CATCAAGGCGAGAAAACGGAAATCGGCGCGATGGCCGATGTGCTGCAGGTGTTCAAGCAGGCGCTGATCGACAAGAAGGC
CGCGGATGAAGCCGCCGCGGTCGACGCCGAAGCCAAGATCGCACGTGGCCAGCGTGTCGACGCGATCACCCGGCAGTTCG
AGTCGATGATCGGCGAGATCGTCCAGACCGTGTCCTCGGCGTCGACCCAACTCGAAGCGTCGGCGGCGTCGCTGTCCTCG
ACCGCCGGTCGATCCCAGGAAGTCACCACCGTCGTCGCCTCGGCCTCCGAAGAGGCGTCGAACAACGTCCAGTCGGTCGC
CTCCGCGACCGAAGAAATGGCCTCGTCGGTCAACGAGATCAGCCGCCAGGTCCAGGATTCGGCGCGGATCGCGGGCGAGG
CGGTGTTGCAGGCGCAGAAGACCAATGCCCGCGTCAGCGACCTGGCGCAGGCCGCGACCCGGATCGGCGATGTCGTCGAG
TTGATCAATTCGATTGCCGGCCAGACCAACCTGCTCGCGCTCAACGCCACCATCGAGGCGGCGCGGGCGGGCGACGCCGG
ACGCGGATTCGCCGTCGTTGCCAGCGAGGTGAAGGCACTCGCCGAGCAAACCGCCAAAGCCACCGGCGAAATCAGCCAGC
AGATCGCCGGCATCCAGTCCGCCACCCAGGAATCCGTCGGCGCGATCCAGGAGATCGGCAACACCATCGGACGGATGTCG
GAAATCGCCTCGACCATCGCTTCCGCGGTGGAAGAGCAGGGCGCCGCGACCAAGGAGATCGCCCGCAACGTCCAGCAGGC
GGCCCAGGGCACACAACAGGTGTCGGCGAACATCGTCGACGTTCAGCGCGGCGCTGGCGAGGCCACGGCGGCTTCGACGC
AGGTGCTGTCGGCGGCCCAGTCATTGTCGGCGGAAAGCGGCCGGCTGAGGGCCGAGGTCGGCAAGTTCCTGGAGTCGGTG
CGCGCAGCCTGA

Upstream 100 bases:

>100_bases
AATTGCGCGTGGCTGGACCGGGGGCGGCGACCTCGCGCTGATCGGCCACCGACGACGGTGGATCGATTTTTCGCGCCTCC
ATCTCGTGAGGCCTCATCTT

Downstream 100 bases:

>100_bases
GGTCGAGGAGCTCCAGCATCAGGCCGCTCGCGATCACTCTGTCGTGAGCGGCCTCTCGCAGCATTCAACTGCGCGCGATA
TCGCCGTGCATCAGGGTTGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MFSRLSIRAKITIVVAFMLVTMSVLGAVAVQKLYAMNASTEDIATNWLPSVRVLGELRAGGITYRNVIRQHMLSFAAEEK
QAMEKTLETVKGNIAKSRAAYEPLITTPAERALYQEWSGLWGDYVRATEEVLNRSRADIGKVSQETRDFNAKTANPIGVK
ADDVLQKDIALNNAGADAATKSAEQTFRSAMVMFVSILVLAAAASIGLGIFLIRDVSRGISSIIQPMQALGRGDLTATVP
HQGEKTEIGAMADVLQVFKQALIDKKAADEAAAVDAEAKIARGQRVDAITRQFESMIGEIVQTVSSASTQLEASAASLSS
TAGRSQEVTTVVASASEEASNNVQSVASATEEMASSVNEISRQVQDSARIAGEAVLQAQKTNARVSDLAQAATRIGDVVE
LINSIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQIAGIQSATQESVGAIQEIGNTIGRMS
EIASTIASAVEEQGAATKEIARNVQQAAQGTQQVSANIVDVQRGAGEATAASTQVLSAAQSLSAESGRLRAEVGKFLESV
RAA

Sequences:

>Translated_563_residues
MFSRLSIRAKITIVVAFMLVTMSVLGAVAVQKLYAMNASTEDIATNWLPSVRVLGELRAGGITYRNVIRQHMLSFAAEEK
QAMEKTLETVKGNIAKSRAAYEPLITTPAERALYQEWSGLWGDYVRATEEVLNRSRADIGKVSQETRDFNAKTANPIGVK
ADDVLQKDIALNNAGADAATKSAEQTFRSAMVMFVSILVLAAAASIGLGIFLIRDVSRGISSIIQPMQALGRGDLTATVP
HQGEKTEIGAMADVLQVFKQALIDKKAADEAAAVDAEAKIARGQRVDAITRQFESMIGEIVQTVSSASTQLEASAASLSS
TAGRSQEVTTVVASASEEASNNVQSVASATEEMASSVNEISRQVQDSARIAGEAVLQAQKTNARVSDLAQAATRIGDVVE
LINSIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQIAGIQSATQESVGAIQEIGNTIGRMS
EIASTIASAVEEQGAATKEIARNVQQAAQGTQQVSANIVDVQRGAGEATAASTQVLSAAQSLSAESGRLRAEVGKFLESV
RAA
>Mature_563_residues
MFSRLSIRAKITIVVAFMLVTMSVLGAVAVQKLYAMNASTEDIATNWLPSVRVLGELRAGGITYRNVIRQHMLSFAAEEK
QAMEKTLETVKGNIAKSRAAYEPLITTPAERALYQEWSGLWGDYVRATEEVLNRSRADIGKVSQETRDFNAKTANPIGVK
ADDVLQKDIALNNAGADAATKSAEQTFRSAMVMFVSILVLAAAASIGLGIFLIRDVSRGISSIIQPMQALGRGDLTATVP
HQGEKTEIGAMADVLQVFKQALIDKKAADEAAAVDAEAKIARGQRVDAITRQFESMIGEIVQTVSSASTQLEASAASLSS
TAGRSQEVTTVVASASEEASNNVQSVASATEEMASSVNEISRQVQDSARIAGEAVLQAQKTNARVSDLAQAATRIGDVVE
LINSIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEISQQIAGIQSATQESVGAIQEIGNTIGRMS
EIASTIASAVEEQGAATKEIARNVQQAAQGTQQVSANIVDVQRGAGEATAASTQVLSAAQSLSAESGRLRAEVGKFLESV
RAA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=494, Percent_Identity=25.7085020242915, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788194, Length=395, Percent_Identity=29.620253164557, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788195, Length=256, Percent_Identity=33.203125, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=29.7450424929178, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789453, Length=195, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59012; Mature: 59012

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]