| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750695
Identifier: 86750695
GI number: 86750695
Start: 4109574
End: 4110260
Strand: Reverse
Name: 86750695
Synonym: RPB_3585
Alternate gene names: NA
Gene position: 4110260-4109574 (Counterclockwise)
Preceding gene: 86750696
Following gene: 86750692
Centisome position: 77.09
GC content: 67.39
Gene sequence:
>687_bases GTGGTTGATCTGTCGTTCATCCTCGACGCGCAGGGCGCGCGCACGCCGCTGACGCTGCCGATCTCGCAGGCCGTGATCGC CGGCTGGACCGGGCGCGATCCGGTGGCGCGCGACAAGCACATCGTCGAACTCGAAGCGCTGGGCATCGCGCGGCCGGCGT CAACGCCGATCTATTATCGCGTCGCGGCGTCGCGCCTCACCATGGCGACGTCGATCGAAGTCTCGGGAGGCGATTCGTCC GGTGAGGTCGAGTTCGTGCTGATCGGCCATGCCGGCCGTATCCTGGTCGGCGTCGGCTCCGACCACACCGACCGCAAAGT CGAGGCCTATGGCGTCACGGTGTCGAAGCAGATGTGCGACAAGCCGATCGCACCGGAGCTGTGGGACTTCAGCGAAGTCG AAGCGCATTGGGACCGGATCGTGCTGCGCTCGTTCGCCACCATCGGTGGCGTGCGCGTGCTGTATCAGGAGGGCACGCTC GACCACATGCTGCCGGCGCGCGAACTGATGTCGCGCGGGTTCGGCGCGGGCGGACTGCCGGACGGCTGCGCGCTGTTCGG CGGCACCTTCGCGGCCAAAGGCGGCATCCGCCCGGCGACCCGGTTCGAGTTCGAGATCGACGATCCGGTGCTGGGGCGCG TCATTCGTCACGGTTACGATGTGATCGAGCTGCCGATTTTGGGGTGA
Upstream 100 bases:
>100_bases CATCAGGACGGCGAAGCGCCGGTCGGGCTGATGGTGGCCGGCGTCAACGGCGCCGATCGCGACGTTTTCGAAGTGGCGGC GGGCGTGGAGGCGGTGCTTC
Downstream 100 bases:
>100_bases GGGGCGCGTTGCGCGTCCTTTTGGTCCCCCACGTCATTCCGGGGCACGCGCGTTAGCGCGTGAACCCGGAATCCAGACGT TCAGGGCACCTCGGGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYRVAASRLTMATSIEVSGGDSS GEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCDKPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTL DHMLPARELMSRGFGAGGLPDGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG
Sequences:
>Translated_228_residues MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYRVAASRLTMATSIEVSGGDSS GEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCDKPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTL DHMLPARELMSRGFGAGGLPDGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG >Mature_228_residues MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYRVAASRLTMATSIEVSGGDSS GEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCDKPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTL DHMLPARELMSRGFGAGGLPDGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24529; Mature: 24529
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYR CEEEEEEEECCCCCCCEEEEHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE VAASRLTMATSIEVSGGDSSGEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCD EEHHHEEEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEHHHCC KPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTLDHMLPARELMSRGFGAGGLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCHHHHHHCCCCCCCCC DGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG CCHHHHCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MVDLSFILDAQGARTPLTLPISQAVIAGWTGRDPVARDKHIVELEALGIARPASTPIYYR CEEEEEEEECCCCCCCEEEEHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE VAASRLTMATSIEVSGGDSSGEVEFVLIGHAGRILVGVGSDHTDRKVEAYGVTVSKQMCD EEHHHEEEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEEEEHHHCC KPIAPELWDFSEVEAHWDRIVLRSFATIGGVRVLYQEGTLDHMLPARELMSRGFGAGGLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCHHHHHHCCCCCCCCC DGCALFGGTFAAKGGIRPATRFEFEIDDPVLGRVIRHGYDVIELPILG CCHHHHCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA