| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750649
Identifier: 86750649
GI number: 86750649
Start: 4051464
End: 4051778
Strand: Direct
Name: 86750649
Synonym: RPB_3539
Alternate gene names: NA
Gene position: 4051464-4051778 (Clockwise)
Preceding gene: 86750648
Following gene: 86750650
Centisome position: 75.99
GC content: 62.22
Gene sequence:
>315_bases ATGACAGCCATTGCCGACATGCCGCTGGACAAGATCGTCGCGAAGCTGGTCGAGCTCACGCCTGCGATCAAGGCTCTGGG CGTCACGCGGCTGGCGGTGTTCGGCTCCCGCGCTCGGGGGGATGCGCGCGTCGACAGCGACCTCGACATTCTGGTCGATA CGACGGCCTATGGAGAAGCCCCCGCATTCGATCTCTTCAAGGTGATGCATCTGATCGAAGACGAGACCGGAATCCGGACG CAGATCACGACACGGACGGAACTGAAGCCTCGGATCGTCGAGCGGATCGCAGACGACGTCGTCGAGGTCTTCTAG
Upstream 100 bases:
>100_bases CGCCGAGGAACTGATCCACAAGCTCAACGCAAGGCTCGGGCATTCGAGCCAGGCGGCGGAGTAGCTGCGGGGGACGGCAA CCTTGTGCTAGGATGCACGA
Downstream 100 bases:
>100_bases ATGCCGCCGAGCGTTGACGATCGCTTTCGCGATATCCTCGATGCCATCGCCGAACTCGACGATCTCCTCCAAGGCTACGA CTTCGAGAAGTTTTCCCGCG
Product: DNA polymerase, beta-like region
Products: NA
Alternate protein names: DNA Polymerase Beta Subunit; Nucleotidyltransferase; DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Beta Domain Protein Region
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTAIADMPLDKIVAKLVELTPAIKALGVTRLAVFGSRARGDARVDSDLDILVDTTAYGEAPAFDLFKVMHLIEDETGIRT QITTRTELKPRIVERIADDVVEVF
Sequences:
>Translated_104_residues MTAIADMPLDKIVAKLVELTPAIKALGVTRLAVFGSRARGDARVDSDLDILVDTTAYGEAPAFDLFKVMHLIEDETGIRT QITTRTELKPRIVERIADDVVEVF >Mature_103_residues TAIADMPLDKIVAKLVELTPAIKALGVTRLAVFGSRARGDARVDSDLDILVDTTAYGEAPAFDLFKVMHLIEDETGIRTQ ITTRTELKPRIVERIADDVVEVF
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11441; Mature: 11310
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIADMPLDKIVAKLVELTPAIKALGVTRLAVFGSRARGDARVDSDLDILVDTTAYGEA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC PAFDLFKVMHLIEDETGIRTQITTRTELKPRIVERIADDVVEVF CHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure TAIADMPLDKIVAKLVELTPAIKALGVTRLAVFGSRARGDARVDSDLDILVDTTAYGEA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC PAFDLFKVMHLIEDETGIRTQITTRTELKPRIVERIADDVVEVF CHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA