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The map label for this gene is bdlA [H]

Identifier: 86750602

GI number: 86750602

Start: 3995695

End: 3997374

Strand: Reverse

Name: bdlA [H]

Synonym: RPB_3492

Alternate gene names: 86750602

Gene position: 3997374-3995695 (Counterclockwise)

Preceding gene: 86750603

Following gene: 86750601

Centisome position: 74.97

GC content: 63.51

Gene sequence:

>1680_bases
ATGTTCGGTCGCCGTTCGAAGAAGAACCCTGATGCGCTGGCGCTGATGGCGGCCAAGGCGGTCCGAGCCAACATCATGGT
GTCGGACGCCAATCTCGACATCGTCTACATGAACGATGCGGTGACGTCGCTGTTGCGCGAAGCCGAATCCGACATGAAGA
AGGAAATGCCGAACTTCAACGTCGACACGCTGGTCGGCACCAATATTGACGGCTTCCACAAGAATCCGAGCCATCAGCGG
CAGATGCTGAAGAGCCTCAGTTCGGTGCATCGCGCCACCATCAAGGTCGGGCCGCGGAGCTTCGATCTGGTGGCGACGCC
GCTGAACAATGCCGACGGCAGCCGCGCCGGCGTCGTGGTCGAATGGGCCGACGCCGCGATCCGGCTGCAGAACGTCGATT
TCGCCGGGCAGGTCGAAGCGATCGGCAAGTCGCAGGCGGTGATCGAATTCAACATGGACGGCACCGTCCGAACCGCCAAC
GAGAATTTCCTGAGGACTCTCGGCTACTCGCTGGCCGAGATCCAGGGCAAGCACCACAGCATGTTCGTCGAGCCGTCGAT
GCGCGGCACGACCGCCTATCGCGAATTCTGGGCGGCGCTGAACCGCGGTGAATTCCAGGCCGCCGAATACAAGCGGATCG
GCAAGGGCGGCAAGGAAGTCTGGATTCAGGCGTCCTACAATCCGATCCTCGACGAGAAGGGCAAACCCGCCAAAGTGGTG
AAATTCGCCACCGACGTCACCGAGCAGAAGCTGAAGAACGCGGATCTCGCGGGGCAGATCGAGGCGATCGGCAAGTCGCA
GGCGGTGATCGAGTTCAACATGGACGGCACCATCATCAACGCCAACGACAATTTCCTGAACGCGCTCGGCTATACGCTGG
CCGAGATCAAGGGCAAGCACCACAGCCTGTTCGTCGATCCGCACGAGCGCGAGGGTGCGGCGTATCGCGAATTCTGGGCG
TCGCTCGGCCGCGGTCAGTATCAGGCGGCGGAATACAAGCGGATCGGCAAGGGGGGCCGCGAAGTCTACATCCAGGCCTC
CTACAATCCGATCCTCGATCTCAACGGCCGGCCGTTCAAGGTGGTGAAATACGCCACCGACGTCACCCAGCAGGTGCTCG
CCCGGATGGGCAATGAGCGCGTGCGCAGCATGATGGAAACCGTCGCCGCCGGCGCCGAGGAACTCAACGCGTCGGTCCGC
GAGATCTCCGCGACGATGACCAAGTCGCGCGAGACCGCGGCCGGCGCCGTCGAACGCGTGGCGAATGCCGACGCTCAGGC
GCAGCGCCTCACCAGCGCGGCGCAGGCGATGAGCGGCATCGTCGAACTGATCAACAACATCACCGGGCAGATCAATCTGC
TCGCGCTCAACGCCACGATCGAATCGGCGCGGGCCGGAGAGGCCGGCCGCGGCTTCGCCGTGGTCGCCGCCGAGGTCAAG
AACCTCGCCAACCAGGCCAAGCAGGCCACCGACAAGATCGGCGAGGAAATCGGCAGCCTCAACATTATCTCGGGCGACGT
CGCCGGCGCGCTGAACGCGATCAAGGAAGCGATCACCCATGTCAGCGAATATGTGACGTCGACCGCGGCTGCGGTCGAGG
AGCAGAGCACGGTGACCAGCGAAATGTCGACAAGCATGCAACGTGCCGCCGCCGAGGCCGCCAGCATCGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
CGTAGTTGCACGCATCTGACTATTAAGTAATTGTTCCGATGTCTCGCTCATAAGACCGATACTCAAGCTGTCGGCTCGAT
CTCGGGTGAGGAGATTTCGG

Downstream 100 bases:

>100_bases
TCGATTCATCGAACTTCGACGAGTGGGCCGGCGGCGCGATCGTTCGCGCTGCGCGGCCCGCGTTCGTTTTGCGGCTGAAC
GTCGCTGCACCAACCTCCCT

Product: methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MFGRRSKKNPDALALMAAKAVRANIMVSDANLDIVYMNDAVTSLLREAESDMKKEMPNFNVDTLVGTNIDGFHKNPSHQR
QMLKSLSSVHRATIKVGPRSFDLVATPLNNADGSRAGVVVEWADAAIRLQNVDFAGQVEAIGKSQAVIEFNMDGTVRTAN
ENFLRTLGYSLAEIQGKHHSMFVEPSMRGTTAYREFWAALNRGEFQAAEYKRIGKGGKEVWIQASYNPILDEKGKPAKVV
KFATDVTEQKLKNADLAGQIEAIGKSQAVIEFNMDGTIINANDNFLNALGYTLAEIKGKHHSLFVDPHEREGAAYREFWA
SLGRGQYQAAEYKRIGKGGREVYIQASYNPILDLNGRPFKVVKYATDVTQQVLARMGNERVRSMMETVAAGAEELNASVR
EISATMTKSRETAAGAVERVANADAQAQRLTSAAQAMSGIVELINNITGQINLLALNATIESARAGEAGRGFAVVAAEVK
NLANQAKQATDKIGEEIGSLNIISGDVAGALNAIKEAITHVSEYVTSTAAAVEEQSTVTSEMSTSMQRAAAEAASIAAG

Sequences:

>Translated_559_residues
MFGRRSKKNPDALALMAAKAVRANIMVSDANLDIVYMNDAVTSLLREAESDMKKEMPNFNVDTLVGTNIDGFHKNPSHQR
QMLKSLSSVHRATIKVGPRSFDLVATPLNNADGSRAGVVVEWADAAIRLQNVDFAGQVEAIGKSQAVIEFNMDGTVRTAN
ENFLRTLGYSLAEIQGKHHSMFVEPSMRGTTAYREFWAALNRGEFQAAEYKRIGKGGKEVWIQASYNPILDEKGKPAKVV
KFATDVTEQKLKNADLAGQIEAIGKSQAVIEFNMDGTIINANDNFLNALGYTLAEIKGKHHSLFVDPHEREGAAYREFWA
SLGRGQYQAAEYKRIGKGGREVYIQASYNPILDLNGRPFKVVKYATDVTQQVLARMGNERVRSMMETVAAGAEELNASVR
EISATMTKSRETAAGAVERVANADAQAQRLTSAAQAMSGIVELINNITGQINLLALNATIESARAGEAGRGFAVVAAEVK
NLANQAKQATDKIGEEIGSLNIISGDVAGALNAIKEAITHVSEYVTSTAAAVEEQSTVTSEMSTSMQRAAAEAASIAAG
>Mature_559_residues
MFGRRSKKNPDALALMAAKAVRANIMVSDANLDIVYMNDAVTSLLREAESDMKKEMPNFNVDTLVGTNIDGFHKNPSHQR
QMLKSLSSVHRATIKVGPRSFDLVATPLNNADGSRAGVVVEWADAAIRLQNVDFAGQVEAIGKSQAVIEFNMDGTVRTAN
ENFLRTLGYSLAEIQGKHHSMFVEPSMRGTTAYREFWAALNRGEFQAAEYKRIGKGGKEVWIQASYNPILDEKGKPAKVV
KFATDVTEQKLKNADLAGQIEAIGKSQAVIEFNMDGTIINANDNFLNALGYTLAEIKGKHHSLFVDPHEREGAAYREFWA
SLGRGQYQAAEYKRIGKGGREVYIQASYNPILDLNGRPFKVVKYATDVTQQVLARMGNERVRSMMETVAAGAEELNASVR
EISATMTKSRETAAGAVERVANADAQAQRLTSAAQAMSGIVELINNITGQINLLALNATIESARAGEAGRGFAVVAAEVK
NLANQAKQATDKIGEEIGSLNIISGDVAGALNAIKEAITHVSEYVTSTAAAVEEQSTVTSEMSTSMQRAAAEAASIAAG

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=181, Percent_Identity=35.9116022099448, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788195, Length=181, Percent_Identity=32.0441988950276, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787690, Length=204, Percent_Identity=32.843137254902, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788194, Length=180, Percent_Identity=35.5555555555556, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789453, Length=159, Percent_Identity=35.8490566037736, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 60311; Mature: 60311

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRRSKKNPDALALMAAKAVRANIMVSDANLDIVYMNDAVTSLLREAESDMKKEMPNFN
CCCCCCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCC
VDTLVGTNIDGFHKNPSHQRQMLKSLSSVHRATIKVGPRSFDLVATPLNNADGSRAGVVV
CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCEEE
EWADAAIRLQNVDFAGQVEAIGKSQAVIEFNMDGTVRTANENFLRTLGYSLAEIQGKHHS
EECCCEEEEECCCCCCHHHHCCCCCEEEEEECCCCEEECCHHHHHHHCCHHHHHCCCCCE
MFVEPSMRGTTAYREFWAALNRGEFQAAEYKRIGKGGKEVWIQASYNPILDEKGKPAKVV
EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHH
KFATDVTEQKLKNADLAGQIEAIGKSQAVIEFNMDGTIINANDNFLNALGYTLAEIKGKH
HHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCC
HSLFVDPHEREGAAYREFWASLGRGQYQAAEYKRIGKGGREVYIQASYNPILDLNGRPFK
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEE
VVKYATDVTQQVLARMGNERVRSMMETVAAGAEELNASVREISATMTKSRETAAGAVERV
EEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ANADAQAQRLTSAAQAMSGIVELINNITGQINLLALNATIESARAGEAGRGFAVVAAEVK
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCEEHHHHHH
NLANQAKQATDKIGEEIGSLNIISGDVAGALNAIKEAITHVSEYVTSTAAAVEEQSTVTS
HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSTSMQRAAAEAASIAAG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGRRSKKNPDALALMAAKAVRANIMVSDANLDIVYMNDAVTSLLREAESDMKKEMPNFN
CCCCCCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCC
VDTLVGTNIDGFHKNPSHQRQMLKSLSSVHRATIKVGPRSFDLVATPLNNADGSRAGVVV
CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCEEE
EWADAAIRLQNVDFAGQVEAIGKSQAVIEFNMDGTVRTANENFLRTLGYSLAEIQGKHHS
EECCCEEEEECCCCCCHHHHCCCCCEEEEEECCCCEEECCHHHHHHHCCHHHHHCCCCCE
MFVEPSMRGTTAYREFWAALNRGEFQAAEYKRIGKGGKEVWIQASYNPILDEKGKPAKVV
EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHH
KFATDVTEQKLKNADLAGQIEAIGKSQAVIEFNMDGTIINANDNFLNALGYTLAEIKGKH
HHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCC
HSLFVDPHEREGAAYREFWASLGRGQYQAAEYKRIGKGGREVYIQASYNPILDLNGRPFK
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEE
VVKYATDVTQQVLARMGNERVRSMMETVAAGAEELNASVREISATMTKSRETAAGAVERV
EEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ANADAQAQRLTSAAQAMSGIVELINNITGQINLLALNATIESARAGEAGRGFAVVAAEVK
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCEEHHHHHH
NLANQAKQATDKIGEEIGSLNIISGDVAGALNAIKEAITHVSEYVTSTAAAVEEQSTVTS
HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSTSMQRAAAEAASIAAG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]