Click here to switch to the map view.

The map label for this gene is 86750601

Identifier: 86750601

GI number: 86750601

Start: 3994689

End: 3995576

Strand: Reverse

Name: 86750601

Synonym: RPB_3491

Alternate gene names: NA

Gene position: 3995576-3994689 (Counterclockwise)

Preceding gene: 86750602

Following gene: 86750600

Centisome position: 74.94

GC content: 71.28

Gene sequence:

>888_bases
ATGGCCATTCGTCCACGCGCGTCGGCGACCAAGCCGGCGGCGCGATCCGCCGTGCGCGCGCCGCGCAACGCGCCCGCCGC
CCGGCTCGCCACCATCGAGGCGACGACCCGCAAAGTCGACGCGCCCGTCCGGATCGACCCGGCCGACACCGACGGCAAGG
CCCGGGTGAAGCGGATGCTGGACCGCGCCGCGACCAGCCGCACGACCAAGACGCCGGCGGCGAAGAAAGTGGTGGTGACC
AAGACCGCCGCCAACACGACCGCGACCAAGACGAGCGCGACCAAGACCAATGCTACCAAGACCAATGCTACCAAGACCAT
TGCTACCAAGACCCGTGCGACCAAGACGGCCGGATCGAGCATCGCCACGAAAGCGGTGGCGAAGAAGACCGTCGCGAACA
AGAATGTCGCCGACAAGGTCGCAGCCGAGGCCTGTGCCACGGACGCGGACGCCGCGGAGACTGCGGAGACCGAGACGGTC
GCCGCTCACGGCGCCGCGCCACCGCCGCCGCGCCGCCGCGGCCCGAGCGGCGTCACCCGGAATGCGGTCGAGCGCTGCAA
CGATCCGCCGCCGCTCGGCGGTCTGCCGCTGATCGACCGCGTCGGGCGCGCCGCCGAGCGCGAGATCGAACGCATCGAAG
TGATCGTCGGCGGCAACCACATCAAGCCCGCGCAGCGCACCGAAGCCGAGCGCCGCGCCCGCACGCTGGCATCGCTCGCC
CGCACGCTCGCCGCGCTGCGCACGCTGCGCAGCGATGAGCAGCGCAGGAGAACGCGCGATGACGACGCCATTCCCCGAGA
CCTCGACGAGTTCAGGCGCGCGCTTTCGCGACGACTGGAGCAGTTGGTCGACGGCCGAGCGCGACCACCTGCTGCAGGGG
ATGAGTGA

Upstream 100 bases:

>100_bases
ACGAGTGGGCCGGCGGCGCGATCGTTCGCGCTGCGCGGCCCGCGTTCGTTTTGCGGCTGAACGTCGCTGCACCAACCTCC
CTGAACCGAGGGCTGTGCCC

Downstream 100 bases:

>100_bases
GGCGGAACTCGCCTTTCTCGACGCGCAATGGGACGTGTTCGCGCATGATCATCAGCGCCCGCCGCTGTTCGCAGCGAACG
GCAGACCGTGGCTGACCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAIRPRASATKPAARSAVRAPRNAPAARLATIEATTRKVDAPVRIDPADTDGKARVKRMLDRAATSRTTKTPAAKKVVVT
KTAANTTATKTSATKTNATKTNATKTIATKTRATKTAGSSIATKAVAKKTVANKNVADKVAAEACATDADAAETAETETV
AAHGAAPPPPRRRGPSGVTRNAVERCNDPPPLGGLPLIDRVGRAAEREIERIEVIVGGNHIKPAQRTEAERRARTLASLA
RTLAALRTLRSDEQRRRTRDDDAIPRDLDEFRRALSRRLEQLVDGRARPPAAGDE

Sequences:

>Translated_295_residues
MAIRPRASATKPAARSAVRAPRNAPAARLATIEATTRKVDAPVRIDPADTDGKARVKRMLDRAATSRTTKTPAAKKVVVT
KTAANTTATKTSATKTNATKTNATKTIATKTRATKTAGSSIATKAVAKKTVANKNVADKVAAEACATDADAAETAETETV
AAHGAAPPPPRRRGPSGVTRNAVERCNDPPPLGGLPLIDRVGRAAEREIERIEVIVGGNHIKPAQRTEAERRARTLASLA
RTLAALRTLRSDEQRRRTRDDDAIPRDLDEFRRALSRRLEQLVDGRARPPAAGDE
>Mature_294_residues
AIRPRASATKPAARSAVRAPRNAPAARLATIEATTRKVDAPVRIDPADTDGKARVKRMLDRAATSRTTKTPAAKKVVVTK
TAANTTATKTSATKTNATKTNATKTIATKTRATKTAGSSIATKAVAKKTVANKNVADKVAAEACATDADAAETAETETVA
AHGAAPPPPRRRGPSGVTRNAVERCNDPPPLGGLPLIDRVGRAAEREIERIEVIVGGNHIKPAQRTEAERRARTLASLAR
TLAALRTLRSDEQRRRTRDDDAIPRDLDEFRRALSRRLEQLVDGRARPPAAGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31385; Mature: 31254

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRPRASATKPAARSAVRAPRNAPAARLATIEATTRKVDAPVRIDPADTDGKARVKRML
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
DRAATSRTTKTPAAKKVVVTKTAANTTATKTSATKTNATKTNATKTIATKTRATKTAGSS
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH
IATKAVAKKTVANKNVADKVAAEACATDADAAETAETETVAAHGAAPPPPRRRGPSGVTR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
NAVERCNDPPPLGGLPLIDRVGRAAEREIERIEVIVGGNHIKPAQRTEAERRARTLASLA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RTLAALRTLRSDEQRRRTRDDDAIPRDLDEFRRALSRRLEQLVDGRARPPAAGDE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIRPRASATKPAARSAVRAPRNAPAARLATIEATTRKVDAPVRIDPADTDGKARVKRML
CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
DRAATSRTTKTPAAKKVVVTKTAANTTATKTSATKTNATKTNATKTIATKTRATKTAGSS
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH
IATKAVAKKTVANKNVADKVAAEACATDADAAETAETETVAAHGAAPPPPRRRGPSGVTR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
NAVERCNDPPPLGGLPLIDRVGRAAEREIERIEVIVGGNHIKPAQRTEAERRARTLASLA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RTLAALRTLRSDEQRRRTRDDDAIPRDLDEFRRALSRRLEQLVDGRARPPAAGDE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA