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The map label for this gene is cycH [H]

Identifier: 86750561

GI number: 86750561

Start: 3956019

End: 3957122

Strand: Reverse

Name: cycH [H]

Synonym: RPB_3450

Alternate gene names: 86750561

Gene position: 3957122-3956019 (Counterclockwise)

Preceding gene: 86750562

Following gene: 86750560

Centisome position: 74.22

GC content: 70.38

Gene sequence:

>1104_bases
ATGGCCTTGTGGTTTGTGTTGGCGATCATGACGGCCGTCGCGGTGTTCGCCGTGCTGTGGCCGCTCGGTCGCGGCGTCCG
CGCCGAGCGCGAGGGCAGCGAAGCCAATGTCTACAAGGACCAGCTTGCGGAGATCGACCGCGACGCCGCCATCGGTCTGA
TCGGCCCTGCCGAAGCCTCCGCCGCCCGCGTCGAAATCGGCCGGCGATTGCTGGCCAGCGCCGATCCCGAAACCGTGGCG
CCGGTGACGACGCGCCGCGGGCCGCGGCGAGGGGTCGCGGTGTTCGCGCTGGTCGGACTGCCGGCGTTGGCGCTCGCGAT
CTATCTGCCGCTCGGCTCGCCGATGCAGGGCGACGATCCGCTGGCGAGCCGGACCAAGACCGCCGCCGCGTCGCAGCCGC
TCGAAAATCTGGTGGCGCAGGTCGAGGCGCATCTCGAGAAGAATCCGACCGACGGCCGCGGCTGGACCGTGCTGGCGCCG
GTGCTGGCCAAGCTCGGTCGGTTCGACGACGCCGCGCGCGCCTATCGAAATTCGCTGACCTATGCCGGCGAAACCGCGGA
CCGCCACGCCGATCTCGGCGAGGTGCTGTCGATGGCGGCGGGCGGGGTGGTCACCGCCGACGCCAAGTCGGCATTCGAGC
GCGCGGTCAAGCTGAACGCCGACGAGGTCAAGGCGAGGTATTTCCTCGGCCTCGCCGCCGAGCAGGACGGCCGGCCGAAG
GACGCCGCGGCGATGTGGCGCGCGATGCTGGAAAAGGCTCCCGCCGATGCGCCGTGGAAGCCGATGCTGCAGGCGCAGAT
CGCCCGGATCGAGGGTGCGCCGCTGCCGGCGCTGCCCGACGAGACGATCGCTTCGGCGCAAAACATGAGCGAGGCCGACC
GCAGCGCGATGATCCGCGGCATGGTCGACAAGCTCGCAGCCCGGCTGCAGCAGAACGGCGACGACGTCGAGGGATGGCTG
CGGCTGGTGCGTGCCTATATGGTGCTGGGCGACGGCGACAAGGTGAAGCAGGCGCAGGCGCAGGCACGGCAGGCGGTGGC
GGGCAATGCCGAGCGGCTCAAGCAGCTCAATGACGGGCTGAAGACTCTGGGGCTCGACGGATGA

Upstream 100 bases:

>100_bases
GCAAATGTCAATTGCGCCGGCGGTCCGGCCATGGTGTAACCCGGCCGGATTTCGACCGCGTCGCAGCCGGCGTTTGCGCT
CTCACCGGAACCCTCCTCGC

Downstream 100 bases:

>100_bases
GGATGCGGCCGGAGCGCGTGCGGTTTTCCGACATAATGGTCCGGCAATTGTCGCGCACGAGCGAGACGCAACGATCTGGC
GCCAATCAGGACGCCGGCAC

Product: tetratricopeptide TPR_4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MALWFVLAIMTAVAVFAVLWPLGRGVRAEREGSEANVYKDQLAEIDRDAAIGLIGPAEASAARVEIGRRLLASADPETVA
PVTTRRGPRRGVAVFALVGLPALALAIYLPLGSPMQGDDPLASRTKTAAASQPLENLVAQVEAHLEKNPTDGRGWTVLAP
VLAKLGRFDDAARAYRNSLTYAGETADRHADLGEVLSMAAGGVVTADAKSAFERAVKLNADEVKARYFLGLAAEQDGRPK
DAAAMWRAMLEKAPADAPWKPMLQAQIARIEGAPLPALPDETIASAQNMSEADRSAMIRGMVDKLAARLQQNGDDVEGWL
RLVRAYMVLGDGDKVKQAQAQARQAVAGNAERLKQLNDGLKTLGLDG

Sequences:

>Translated_367_residues
MALWFVLAIMTAVAVFAVLWPLGRGVRAEREGSEANVYKDQLAEIDRDAAIGLIGPAEASAARVEIGRRLLASADPETVA
PVTTRRGPRRGVAVFALVGLPALALAIYLPLGSPMQGDDPLASRTKTAAASQPLENLVAQVEAHLEKNPTDGRGWTVLAP
VLAKLGRFDDAARAYRNSLTYAGETADRHADLGEVLSMAAGGVVTADAKSAFERAVKLNADEVKARYFLGLAAEQDGRPK
DAAAMWRAMLEKAPADAPWKPMLQAQIARIEGAPLPALPDETIASAQNMSEADRSAMIRGMVDKLAARLQQNGDDVEGWL
RLVRAYMVLGDGDKVKQAQAQARQAVAGNAERLKQLNDGLKTLGLDG
>Mature_366_residues
ALWFVLAIMTAVAVFAVLWPLGRGVRAEREGSEANVYKDQLAEIDRDAAIGLIGPAEASAARVEIGRRLLASADPETVAP
VTTRRGPRRGVAVFALVGLPALALAIYLPLGSPMQGDDPLASRTKTAAASQPLENLVAQVEAHLEKNPTDGRGWTVLAPV
LAKLGRFDDAARAYRNSLTYAGETADRHADLGEVLSMAAGGVVTADAKSAFERAVKLNADEVKARYFLGLAAEQDGRPKD
AAAMWRAMLEKAPADAPWKPMLQAQIARIEGAPLPALPDETIASAQNMSEADRSAMIRGMVDKLAARLQQNGDDVEGWLR
LVRAYMVLGDGDKVKQAQAQARQAVAGNAERLKQLNDGLKTLGLDG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39044; Mature: 38913

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALWFVLAIMTAVAVFAVLWPLGRGVRAEREGSEANVYKDQLAEIDRDAAIGLIGPAEAS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHH
AARVEIGRRLLASADPETVAPVTTRRGPRRGVAVFALVGLPALALAIYLPLGSPMQGDDP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LASRTKTAAASQPLENLVAQVEAHLEKNPTDGRGWTVLAPVLAKLGRFDDAARAYRNSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
YAGETADRHADLGEVLSMAAGGVVTADAKSAFERAVKLNADEVKARYFLGLAAEQDGRPK
CCCCCHHHHCCHHHHHHHHCCCCEECHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCH
DAAAMWRAMLEKAPADAPWKPMLQAQIARIEGAPLPALPDETIASAQNMSEADRSAMIRG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MVDKLAARLQQNGDDVEGWLRLVRAYMVLGDGDKVKQAQAQARQAVAGNAERLKQLNDGL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KTLGLDG
HHCCCCC
>Mature Secondary Structure 
ALWFVLAIMTAVAVFAVLWPLGRGVRAEREGSEANVYKDQLAEIDRDAAIGLIGPAEAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHH
AARVEIGRRLLASADPETVAPVTTRRGPRRGVAVFALVGLPALALAIYLPLGSPMQGDDP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LASRTKTAAASQPLENLVAQVEAHLEKNPTDGRGWTVLAPVLAKLGRFDDAARAYRNSLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
YAGETADRHADLGEVLSMAAGGVVTADAKSAFERAVKLNADEVKARYFLGLAAEQDGRPK
CCCCCHHHHCCHHHHHHHHCCCCEECHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCH
DAAAMWRAMLEKAPADAPWKPMLQAQIARIEGAPLPALPDETIASAQNMSEADRSAMIRG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MVDKLAARLQQNGDDVEGWLRLVRAYMVLGDGDKVKQAQAQARQAVAGNAERLKQLNDGL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KTLGLDG
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]